Detail


ID : Ahg928085

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|928085|scaffold_300542.1
Sequence
AGCTTGAGAG TTTTGTGAAG ATGGTCTTAG TGCTATTCGA GACAGCGGCT GGTTTTGCCC TCTTTAAAGT GAAAGATGAA GGAAAGATGG CTAACGTTGA GGATTTGTGT AAAGAGTTCG ACACTCCAGA CTCAGCACGA AAGATGGTTA AGCTAAAAGC TTTTGAGAAG TTTGACAACA CATCTGAAGC TCTCGAAGCT GTGGCTAAGT TGCTTGAGGG AGCTCCAAGC AAAGGTCTGC GCAAGTTTTT GAAAGCTAAT TGTCAAGGTG AAACCTTAGC TGTTGCTGAT TCAAAGCTTG GGAATGTGAT CAAGGAGAAA CTGAAAATTG ATTGCATTCA CAACAATGCT GTTATGGAGC TTCTACGAGG AGTTAGAAGT CAGTTTACTG AACTCATATC TGGGTTGGGT GATCAAGACT TGGCACCTAT GAGCTTGGGT CTGTCTCACA GTCTTGCTAG ATATAAGCTA AAGTTTAGTT CTGACAAGGT GGATACCATG ATTATCCAAG CTATCGGTTT ACTTGATGAT CTTGACAAAG AACTGAACAC ATACGCCATG AGGGTTAGAG AATGGTATGG ATGGCATTTT CCCGAGCTTG CTAAGATCAT ATCAGACAAT ATCCTATATG CCAAATCTGT TAAATTGATG GGAAACAGAG TTAATGCTGC AAAGCTAGAC TTCTCCGAGA TCTTAGCGGA TGAAATTGAG GCAGATCTCA AGGACGCAGC TGTGATATCC ATGGGAACAG AAGTCAGTGA CCTAGACTTG TTGCACATCC GTGAACTCTG TGACCAGGTT CTTTCTCTTT CTGAGTACAG AGCTCAGCTT TACGATTACC TGAAGAGCAG AATGCACACA ATTGCTCCCA ATCTGACTGC CCTTGTTGGA GAGCTAGTTG GTGCCCGTCT GATTTCTCAT GGAGGTAGTT TATTGAACCT CTCCAAGCAA CCTGGGAGCA CGATTCAGAT ACTCGGAGCT GAAAAAGCTC TCTTTAGAGC TCTTAAGACA AAACACGCCA CACCCAAGTA CGGTTTGATT TACCACGCAT CTGTGGTTGG TCAAGCAGCA CCAAAGCACA AGGGAAAGAT CTCGCGGTCA TTAGCTGCTA AAACTGTTCT TGCTATTAGG GTTGATGCTC TTGGTGATGG CCAGGATAGC ACTATGGGAC TTGAGAACCG AGCTAAGCTT GAAGCGCGGT TGAGAAATCT TGAAGGAAAA GATTTAGGAC GTCTGTCTGG TTCAGCTAAA GGCAAACCTA AGATTGAAGT CTATAACAAG GATAAAAAGA TGGGATCTGG CGGTCTTATC ACTCCTGCTA AGACTTACAA CACTGCTGCA GATTCTCTTC TTGGGGAATC CTCGGCTAAA TCTGAGGAGC CATCGAAGAA GAAAGATAAG AAAAAGAAGA AGAAGGTAGA AGAAGAGGAA CCCGAAAAGG AGGAGCCATC AAAGAAGAAG AAGAAGAAGA AAGCTGAAGC AGAAACTGAA GCCGTAGAGG TTGCAAAGGA GGAGAAGAAG AACAAGAAGA AGAGAAAGCA TGAGGAAGAA GAAACAACTG AGACACCAGC CAAGAAGAAA GATAAGAAAG AGAAGAAAAA GAAGAGCAAG GACTGAGGGA GAGAGGAAAA GATTTT
Length1636
Protein Sequence
Protein Residue
Map Locationscaffold_3: 1764332.. 1766837
Download Sequence
A.thaliana
AGI-codeAT3G05060.1
DescriptionNOP56-like pre RNA processing ribonucleoprotein
TAIR curator summarySAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein
Alias
Gene coexpression
MR
MR Locus Description
2 Ahg486159 homologue of NAP57
3.4641 Ahg492297 FK506 BINDING PROTEIN 53
7.14143 Ahg474678 homolog of nucleolar protein NOP56
9 Ahg489610 NOP56-like pre RNA processing ribonucleoprotein
10.0499 Ahg483616 Ribosomal protein L24e family protein
10.9545 Ahg339148
12.4499 Ahg941477
12.9228 Ahg482420 PIN domain-like family protein
14.1421 Ahg478647 NOP56-like pre RNA processing ribonucleoprotein
14.3527 Ahg486447 LETM1-like protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression