Detail



ID : Ahg478315

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478315|fgenesh2_kg.3__1016__AT3G09910.1
Sequence
AGCGAAATGT CGGAGAAAGA CGAAGAAGCA TATTTGTTCA AATTCTAGTA AGCGTTTTTC ATTATTTTTT CTGCTCTGTA AAGAATAAAG TTTCTTAATT TTGTTTGTAT GAATCATAGA TTTTCGATTC ATTCTTTTAC AGAAAAAAAT CACTTTTTTT TTTTGTTGGT TAAATTTGAG TTGATCTCTA GTTCTCTACT GTGGTATATT AAGATCGAGG GTTTTAGAGT GAGAGATTGT AGAAATGGGA TCTTCTTCTG GGCAAAGTGG TTATGATCTA TCTTTTAAGA TCTTGTTGAT TGGAGATTCT GGTGTTGGTA AAAGTAGCTT GCTTCTCAGC TTCATTTCTA GCTCTGTCGA AGATCTTGCT CCCACCATTG GTGTTGATTT TAAGATCAAA CAGATGAAAG TGAGAGGGAA AAGACTAAAA CTTACAATCT GGGACACAGC TGGACAAGAA AAGTTCAGAA CATTGACAAG TTCTTATTTC AGGGGCTCCC AAGGAATCAT TCTCGTTTAT GATGTGACGA AAAGAGACAC ATTTATGAAC TTGGCAGATG TTTGGGCTAA AGAGATTGAG CTATATTCGA CTAACCATGA CTGCATTAAG ATGCTTGTTG GCAACAAAGT TGATAGAGAA TCTGAGAGGA AGGTTAGCCG GGAAGAAGGA ATGACTCTAG CGAAAGAACT CAAGTGTTTG TTTCATGAAT GTAGCGCAAG AACCAGAGAA AACGTGAACT GGTGCTTCGA AGAGCTTGCT TTGAAGATAA TGGAGGTACC TAGTCTTTTG GAAGAAGGAT CAAGCTCTGT GAAGAGAAAA CCGGATTACC GATCTCATCA AGGCCGGTGT TGCAGCTCGT GAGTCACCTT GTTAAACCCG GGTCGGAAGT AGCCTCTTTT GTGTGTAAAT TTCTCAAGCA GCTTAGCTTC TCTGTAAATT TATCAATTCC TTGGATCTTT CTTCTTCTTG CCTCGGCTGA GATTGTGTAA TAAGTT 
Length996
Protein Sequence
Protein Residue
Map Locationscaffold_3: 3677173.. 3678915
Download Sequence
A.thaliana
AGI-codeAT3G09910.1
DescriptionRAB GTPase homolog C2B
TAIR curator summary
Alias[ATRAB18C][ATRABC2B][RABC2b][RAB GTPase homolog C2B]
Gene coexpression
MR
MR Locus Description
15.5242 Ahg939699
43.1741 Ahg483960 TSPO(outer membrane tryptophan-rich sensory protein)-related
62.857 Ahg322281 G-box binding factor 3
63.2456 Ahg494028 NAC domain containing protein 6
68.8477 Ahg478447 DRE/CRT-binding protein 2B
72.5121 Ahg491837 Zinc finger C-x8-C-x5-C-x3-H type family protein
73.2393 Ahg914030 methionine gamma-lyase
75.6307 Ahg488585 glutathione S-transferase phi 12
79.5613 Ahg495797 Protein phosphatase 2C family protein
80.4239 Ahg489834 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression