Detail



ID : Ahg491837

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|491837|fgenesh2_kg.7__1270__AT4G29190.1
Sequence
TTAAAGAAGA TGATGATCGG AGAAACTCGC CGGACTTATC CTACTGTTGA AATACCTCCA TGGCCAGTTT CTGAAGAGCT TACGGCGTCG GAGTTTTTTT CTCCGGTGAT GAATAGTCCA GATTGTAGCA TGCTTGAAGC TTTGGCGGCG TTGCAGCGTT ATCTTCCGTC TAACGAACCG GATCCGGATT CTGACCCGGA TTTATTGGGT CCTGATTCAC CAATCGATGC TTACTCATGT GACCATTTCC GTATGTACGA TTTCAAAGTC CGGAGGTGTG CTCGTGGCCG GAGTCATGAT TGGACGGAGT GTCCGTACGC ACATCCCGGA GAAAAAGCTC GCCGGAGAGA TCCGAGGAAG TACCATTACT CCGGTACGGC TTGTCCTGAT TTTCGCAAAG GTGGTTGCAA GAAAGGTGAT TCTTGTGAGT TCGCTCATGG AGTTTTCGAG TGTTGGCTTC ATCCAGCTCG TTACCGGACT CAGCCGTGTA AAGACGGTGG TAACTGTCGC CGGAAAGTTT GTTTCTTTGC TCATTCACCG GATCAGTTGA GGTTTTTACC GAGTCGGAGC CCCGATCGGG TTGATTCTTT CGACGTTTCG TCTCCGATTC GTGCTAGAGC GTTTCAGCTC TCGATTTCGC CGGTTTCTGG TTCGCCGCCG ATGAGTCCAA GAGCTGACTC GGAGTCTTCT CCGATGACTC AATCACTTAG TCGATCTCTC GGGTCTTGTT CGATAAACGA CGTCGTTCCT TCGTTTAGGA ACTTACAGTT TAATAAGGTA AAATCATTTC CTCATAACAA TCCTTTATTC GGATTCGGGT CGCCCCGTGG ATCGATTTTG GGTCCTGGGT TTCAGTCTCT GCCTACAACA CCGACCCGAC CCGGAAATCT GGATATTTGG GACTATGGGT TAGAGGAAGA GCCTGTAATG GAGCGGGTCG TTGAGTCGGG TCGTGAGCTA CGAGAAAAGA TGCGCGAGAA ACTACACAAG GAGAATTGCT TGGATCGGGT TGACCCGGAT CCGGATCAGA AGTCGGGTGA TGCTCCTGAT GTCGGGTGGG TATCTGACCT GCTGATGTAA AGAATGAAAC CCGACTTGTA TTTCGAAGTC TCATTGGTTT TTTTGGGAAG AGATCTTAGT GTGTTCATAT TATTTTATTT ACTAATTTCG TATTTTGGGT CCTGATTTTT CTGAGAAATC GTTGTATAGA TGTGCCTTAG GGTTTTAATT ATGGAACATT AATATATATA TCGTGTTTTA TAAGGCTATA TTGTTAAATG TAACCACTTG TTACTAATCT ATGAATG 
Length1307
Protein Sequence
Protein Residue
Map Locationscaffold_7: 5041056.. 5042426
Download Sequence
A.thaliana
AGI-codeAT4G29190.1
DescriptionZinc finger C-x8-C-x5-C-x3-H type family protein
TAIR curator summary
Alias[AtC3H49][AtOZF2][AtTZF3][OZF2][TZF3][Arabidopsis thaliana oxidation-related zinc finger 2][oxidation-related zinc finger 2][tandem zinc finger 3]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg480488 CCCH-type zinc finger family protein
7.74597 Ahg490624 farnesylated protein 6
9.79796 Ahg942000 pseudo-response regulator 5
13.3041 Ahg475919 flavin-binding, kelch repeat, f box 1
14.9666 Ahg493915 PQ-loop repeat family protein / transmembrane family protein
15.7797 Ahg934616 phosphorylethanolamine cytidylyltransferase 1
16.4317 Ahg471553
17.1464 Ahg475836 Rubber elongation factor protein (REF)
17.6068 Ahg919881 Pyruvate phosphate dikinase, PEP/pyruvate binding domain
17.8885 Ahg316716 Transducin/WD40 repeat-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression