Detail



ID : Ahg478335

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478335|fgenesh2_kg.3__1036__AT3G10070.1
Sequence
ACATTCACAA CCTTCTCATG GATCAGCCAC GGCAAAGCAC GACGGCGTCT CAGCCACCGG AAACACCGCC TCAGCCGTCG GATTCAGCAT CGAAACCAGC GACTTTAACA CAGATTCAAC CACCGCCTTC CACAAATCCG AGTCCCACCT CCGTTGTTTC CTCTATTCCT TCTTCCCCAG CTCCACAATC ACCATCGCTC AATCCAAACC CTAATCCTCC TCAATACGCG CGTCCGGTGA CATCTCCGGC GACGCAACAG CAGCAACATC TCCCCCAGCC TTTGGTACGG CCACCTCCGC AGGCGTACTC GAGACCATGG CAACAACACT CCTCTTACAC TCACTTCTCC TCCCCTTCGT CGCCATTGTT ATCTTCCTCA TCAGCTCCGG CATCTTCGTC TTCGTCTTTA CCTATTACTG GGCAACAAAG GGGTGGCATG GCGATTGGCG TTCCAGCTTC CCCAATTCCG AGTCCTTCTC CTACTCCTTC TCAACATACG CCTTCTGCTT TTCCCGGCTC TTTTGGGCAG CAGTACGGCG GATTAGGTCG TGGAACTGTT GGAATGTCAG AAGCTACGTC CAATTCAAGT GCCCCTCAGG TTAGGATGAT GCAAGGATCT CAGGGAATTG GGATGATGGG GACACTTGGC TCAGGTTCCC AAATGAGACC GAGTGGGATG GCTCAGCATC AACAGAGACC AACTCAATCG TCTCTAAGAC CAGCTTCCTC CCCAAGTACC CAATCTCCTG TTGCCCAAAA CTTTCAAGGA CATAGCCTTA TGAGACCTTC ACCTATTGGT TCTCCTAGTG TGCAATCTAC TGGTGCATCA CAACAAAGCT TGCAAGCTAT TAATCAACCT TGGTTATCAT CTACTCCCCA AGGGAAGCCG CCTTTGCCAC CTCCTTCGTA TAGACCACAA GTAAATTCTC CCTCCATGCA ACAAAGACCT CATATTCCTC AGCAACATCT TTCTACGTCA GCAGCAACTT CACAGCCTCA GCAACTACAA TCTCAACAAC AACATCAGCC TCAAGAGCAA CTTCAACAAT TGAGATCTCC GCAGCAGCCT TTACCTCACC CACATCAACC AACCCGGGTC CAAGGGTTGG TAAATCAGAA AGTTACTTCT CCGGTAATGC CGAGCCAGCC TCCTGTGGCT CAACCAGGAA ACCATGCTAA AACAGTTTCT GCAGAGAATG AGACATCTGA TGATCGTATC CTGGGGAAAC GAAGCATCCA TGAGCTACTT CAACAGATTG ACCCGTCAGA GAAATTGGAT CCAGAGGTTG AAGACATCCT TGCTGATATT GCTGAAGATT TTGTGGAGTC AATCACAACT TTTGGCTGTT CTTTAGCCAA GCATAGAAAG TCAGATACTC TAGAGGCTAA GGACATCTTG CTCCATGTTG AAAGAAACTG GAATATCAGG CCTCCTGGTT TTAGCAGTGA TGAGTTCAAG ACATTTCGAA AGCCATTGAC AACAGATATT CACAAAGAGC GACTTGCGGC AATAAAGAAG TCGGTCACGG CAACAGAAGC AGCAAACGCC AGGAATCAGT TTGGGCATGG GACTGCTAAT GCAAGGGGCG GTCAGGCAAA GACGCCTTCT AATCCCTTGG GCTCTACAAC TTTCAATCAC TGATGTATTA GATCAACCCT CCAATCGTGT TTTGTAGGAA TTTTCCATTA CAAAGGTACG AATGTTGTAA CACCCATTTT GTACAGTCCA AGATAACTAC AAGCATGGAG GCTAGGCTAG ATCTTAATTT TAACCATTAG TAAAGTATCT TACCACCTTA TGGGATTGAA TTGATTCAAT GTTTTGCAAA GCACAAAGGT GTATGAATTG AGAGATGAGA CACAGTTATA AAGCGGTTAC GAACCGGACT AGCTGGTATT ATCCATTAAA CAGATTCTTC TCATACAGTT GAATCTTCC 
Length1939
Protein Sequence
Protein Residue
Map Locationscaffold_3: 3769854.. 3773140
Download Sequence
A.thaliana
AGI-codeAT3G10070.1
DescriptionTBP-associated factor 12
TAIR curator summaryEncodes one of two Arabidopsis proteins with similarity to the TBP-associated factor TAF12.
Alias[TAF12][TAFII58][TBP-associated factor 12][TATA-ASSOCIATED FACTOR II 58]
Gene coexpression
MR
MR Locus Description
8.60233 Ahg487063 hydroxyproline-rich glycoprotein family protein
12.7671 Ahg474512
19.5959 Ahg483312 C-CAP/cofactor C-like domain-containing protein
19.7484 Ahg923455 P-loop containing nucleoside triphosphate hydrolases superfamily protein
24.5967 Ahg471648 basic pentacysteine 2
32.8634 Ahg928063 cysteine synthase D1
36.4555 Ahg928272 Tetratricopeptide repeat (TPR)-like superfamily protein
41.8927 Ahg476621 plastid transcriptionally active 2
47.697 Ahg470771 Transcription factor IIA, alpha/beta subunit
58.3095 Ahg484298 Small nuclear ribonucleoprotein family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression