Detail



ID : Ahg478459

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478459|fgenesh2_kg.3__1160__AT3G11200.1
Sequence
TTTTTCTTTT CTCTCTCTCT CATATTTCTT CTTCTTCCGT CTGCTTCTCT CCATCTCCTT CCAACTCTCT CTCTCTTCAT GCCCGAACGC ATCGGGTCTT AAAATCCATT GATACAGACA TCGATCCTTG TCAACTAGTC TTGATCTTAT AAATCTGTTG AGATATGGCC GCCGCAGCCG TTTCCTCTAA CCCTCGCAAC GTTGAAGAGA TCTTCAAAGA TTATAGCGCT CGTCGTGCCG CTCTTCTTCG TGCTCTCACT AAAGATGTTG ATGATTTTTA CTCTCAATGC GATCCGGAAA AGGAGAATTT GTGTTTGTAC GGACACCCTA ATGAGTCATG GGAAGTGAAT CTACCAGCAG AGGAAGTTCC TCCTGAGCTA CCTGAGCCTG CTCTTGGTAT CAATTTCGCT AGAGATGGTA TGCAGAGGAA AGATTGGCTT TCTCTTGTTG CTGTTCACAG TGATTGTTGG TTGCTCTCTG TTTCTTTCTA CTTTGGAGCT CGTCTTAATC GCAATGAGAG GAAGCGGTTA TTCAGTCTGA TCAACGATCT CCCAACTCTC TTCGATGTAG TGACTGGTAG GAAAGCCATG AAAGACAACA AGCCAAGCTC GGATTCCGGA AGCAAATCCA GAAATGGCAC TAAGAGATCA ATAGACGGGC AGACAAAGAG CTCAACACCG AAACTAATGG AAGAGAGCTA TGAGGAGGAA GAAGAAGAAG AAGACGAGCA TGGAGACACT CTCTGTGGGA GCTGTGGAGG TAATTACACA AATGAGGAGT TCTGGATTTG CTGTGATGTT TGTGAACGCT GGTACCATGG AAAATGCGTT AAGATAACTC CGGCTAAAGC AGAGAGCATC AAGCAGTATA AATGCCCGCC TTGCTGTGCA AAGAAAGGAA GACAGTGATG GTGATGAATT GATGATGATG ATGATCTCTC AGAGAGACTC TGGTTCTCAT GTTTTAATCA ATATGTTAAT CAACTTTTTT TCTTTTTCTT TTCTTTTTTT TCTTTAACCT TTTAATTTTA AAGCATACAA AACTCTCTCT TTAGATCTCA AGAAAGGGAT TTCAAGAAGT TGATAGAGAG AGTAGCAACT GTTTGAGTAA TATTATTATT ATTCATATTT AAAAAAAAAA AATGTGTCAT TGGGTTTGTA TATGTAGTCA AATCTTTAAG CTTTGAACTG TATTTTG 
Length1197
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4229761.. 4232225
Download Sequence
A.thaliana
AGI-codeAT3G11200.1
Descriptionalfin-like 2
TAIR curator summaryAL2 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.
Alias[AL2][alfin-like 2]
Gene coexpression
MR
MR Locus Description
3.4641 Ahg927990 Ankyrin repeat family protein
5.38516 Ahg487826
6 Ahg488911 Uncharacterised protein family (UPF0041)
8 Ahg480493 profilin 1
8.94427 Ahg929422 RING/U-box superfamily protein
13.1149 Ahg475711 Translation initiation factor eIF3 subunit
21.5407 Ahg933960 P-loop containing nucleoside triphosphate hydrolases superfamily protein
21.6333 Ahg929690 TCP-1/cpn60 chaperonin family protein
22.8035 Ahg483560 Citrate synthase family protein
23.4521 Ahg490265 oxidoreductase, 2OG-Fe(II) oxygenase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression