Detail



ID : Ahg490265

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490265|fgenesh2_kg.6__3399__AT4G02940.1
Sequence
ACCTTCTCAT TACACTTGCA TGTGCAGCGA CCCGACCCGG CCCACATTTC CAACCCATTT TCACCTTTTT CTGTTTCCGC CGCCGACTGA TCGATCCCGA GAGAATAACT GAATCTTTCA CCGGAGTTCA ACGCCGATGA CGATTGCGGC AGCACAAGCA CGCCAGACAG ATCGATCAAC CACTGGTTTC ACTTTCGCAA CGACGGCGAA GGCGGTGACT GTTCCGGTTC AAGTTCCACC GGGAACTGTG GTTTCCGAAG GATTAGGTAA AGATGCGTTA ATCTCGTGGT TCAGAGGAGA ATTCGCGGCG GCGAACGCTA TAATCGACGC GATGTGCTCG CATCTTAGGA TAACTGAAGA AGCGGTGTCT GGATCGGGAT ACGAAGCTGT TTTCGCGGCG ATCCATCGCC GGCGTCTGAA TTGGATCCCT GTTCTTCAGA TGCAGAAGTA TCATTCCATC GCTGAAGTCG CGATCGAGCT TCAAAAAGTG GCGGCTAAGA AAGCGGAGGA TCTGAAACAG AAGAAAACAG AGGAGGAGGA AGATCTGAAA GAGGTGGCGG CGGAGGAGGA GGAAGTGGAG AAGAAAGATT GTTTTAACGG CGAGAAACTA ACGGAAAATG ACGTAAACGG AGATGTGGAA GACGTTGAAG ATGATTCACC AACTAGTGAT ATCACTGATT CAGGTTCTCA CCAGGATGTT CACCAAACTG CTGCTGCGGA TACGGCACAT CAGATAATAT GCCAGAGCCA TGAAGATTGT GAAGCACGGT CATGTGAGAT TAAGCCTATC AAAGGTTTCC AAGCCAAAGA GCAAGTCAAA GGACACACTG TGAATGTTGT GAAAGGACTA AAGCTGTATG AAGAATTACT TAAAGAAGAT GAGATATCTA AATTGATCGA CTTTGTGGCA GAACTCCGAG AAGCTGGCAT TAACGGAAAG CTAGCAGGTG AGAGCTTTAT ACTGTTCAAC AAACAGATTA AAGGGAACAA GAGAGAGCTG ATTCAGCTTG GTGTCCCCAT CTTTGGCCAT GTTAAGGCGG ATGAAAACTC TAACGACACC AACAACTCTG TTAACATTGA GCCAATTCCA CCACTTCTTG AGAGTGTGAT TGATCACTTT GTCACATGGA GACTCATCCC AGAATACAAG AGACCAAACG GCTGTGTCAT CAACTTCTTT GAAGAGGGTG AATACTCACA GCCTTTCCTC AAACCACCAC ATCTAGAACA ACCAATCTCC ACTCTTGTTC TCTCTGAATC AACAATGGCC TATGGACGCA TTCTCTCTAG TGACAACGAA GGCAACTTCA GAGGACCTTT AACTCTTTCT CTCAAACAAG GATCTTTGTT GGTGATGAGA GGGAACAGTG CAGACATGGC AAGACATGTA ATGTGTCCAT CACAAAACAA AAGAGTAAGC ATCACATTCT TTCGTATTCG ACCTGACACA TATCATAACC ATTCACAACC CAACAGTCCT CGCAACGACG GTGTAATGAC AATGTGGCAA CCTTACCAAA TGACACCAAC TCCATTCCTC AATGGCTATG ATCATTCAAT TGACATGATG CCAAAACTTG GAGTCCTACG TCCTCCAATG GTCATGATGG CACCACCACC AGTTCAACCA ATGATATTAC CAAGTCCCAA TGTGATGGGA ACCGGTGGTG GTACCGGTGT TTTCTTACCA TGGGCCTCTG TTAATAGCTC AAGAAAACAT GTGAAGCATT TGCCTCCACG CGCGCAGAAG AAGCGATTAC TTCCGCTTCC TCCTGCTGCT TCTTCTTCTC CAGCTGGAGG ATCCACCTCT GAGCCTGTGA TCAGTGTCGG TTAAGCCTAT TCGACTTCTT CAGCAAAAAA AAAAAAAGCT TTGAACTGGT CTGTGTCTAA GCCATGCTCT GTTTCTTCTC TTTTCAAATT CAGTTTAGGT TAACTCAGGT TTTATAGATA GAATTAAGTT TGTTACATCC CCAGAGGCAT GTGTTTTCTA TTTTGTGTAC GATTTTATTA TCAGTATATT CTCAAAATGT TACCTTTCAT TGCTAGTTTT C 
Length2051
Protein Sequence
Protein Residue
Map Locationscaffold_6: 21951887.. 21957052
Download Sequence
A.thaliana
AGI-codeAT4G02940.1
Descriptionoxidoreductase, 2OG-Fe(II) oxygenase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.7082 Ahg495435 conserved peptide upstream open reading frame 50
8.48528 Ahg477600 RING/U-box superfamily protein
11.5326 Ahg481472 cytochrome P450, family 711, subfamily A, polypeptide 1
13.6382 Ahg494080 HXXXD-type acyl-transferase family protein
14.1774 Ahg490848 heptahelical protein 4
15.748 Ahg486261
15.8114 Ahg495754 phosphofructokinase 7
19.105 Ahg486402 UDP-galactose transporter 6
21.3307 Ahg890460 Major facilitator superfamily protein
22.4499 Ahg492472 UDP-D-glucose/UDP-D-galactose 4-epimerase 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression