Detail



ID : Ahg927990

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|927990|scaffold_300447.1
Sequence
AGTGAGTGTT GTGGAAAATA ATGGAAGATT ACTCCAAGTA TACTCACAGT CCTGCTCATT TAGCGGTTGT GCTACGTGAT CATGCGGCTC TTAGGCGAAT TGTTTCGGAT CTTCCTCGGT TAGCTAAGGC TGGTGAAGTT ACTACAGAGG CTGAGTCTAT GGAGTCTGAA GCTCATGCTG ATTCTGTTTC AGCTGTCATT GATCGCCGTG ATGTTCCTGG TCGTGAAACT CCATTGCATC TCTCTGTTCG TCTTAGAGAT CCTGTCTCTG CTGAGATTTT GATGTCTGCT GGTGCGGATT GGAGTCTACA GAACGAGAAT GGTTGGAGTG CGTTACAAGA AGCGGTTTGC ACTAGAGAAG AGGCCATCGC CATGATCATT GCTCGGCATT ACCAGCCTCT TGCTTGGGCT AAATGGTGCA GGAGACTTCC TCGGATCATT GCATCAGCAT CTCGAATCCG TGATTTTTAC ATGGAGATCA CTTTTCATTT TGAGAGCTCC GTAATTCCGT TTATTGGCCG CATTGCTCCT TCCGATACTT ACAGGATATG GAAACGTGGT TCGAATCTCC GTGCTGATAT GACTCTTGCC GGTTTTGATG GGTTTAAAAT CCAGCGGTCA GATCAAACAT TTCTCTTTCT AGGGGATGGT TACTCGTCTG AAGACGGTAA AATGTCCCTA TCTCCGGGCT CGTTGATTGT TCTTTCGCAT AAGGAAAAAG AAATGACAAA TGCTTTGGAA GGAGCTGGTG CGCAACCGAC AGATGCTGAG GTTGCTCATG AAGTGGCTTT GATGTCTCAG ACTAATATGT ATAGACCTGG AATCGATGTA ACTCAAGCTG AGCTGGTTTC TCATTTGAAT TGGAGACGGC AAGAGAGAAC TGAGATGGTT GGGAATTGGA AAGCAAAAGT TTACGATATG CTTCATGTGA TGGTGAGTGT GAAATCTAGA CGGGTCCCTG GTGCAATGAC TGATGAAGAG CTCTTTGCGG TTGATGAAGA GCGAACTGCT GCAACAAACG GTGCAGAGAC CAATGGCTTT GAAGACGTAT TAACACCTGA GGAAAGACTC CAATTGAATT CCGCGCTTCA GACTGGAAAT TCCGATGCCA TTGAAGATGA AGAGTGTGAA GTTACTGATC ACCAGGAAAA CGGAGCTCTC AAGGATAAGA AGGGCTGGTT TGGTTGGAAT AAGAAAGGCT CAAACACTGA AGATACAAAG CTCAAGAAAG GCTCAAAGTC TGCGCCTGAA GACGGGAATC AGAAAGGGAA AAGCCAGAGA TCTTCGATGG TATCTGATCA TGCAAATGAG GATCTTGGAG ACGCAAAGAA AGGAAAGGAG AAGAAGAAGA AGAAGAAAGG TGTTGCCGGA GATGAGGTTA AGCGTGAGAG TGAATACAAG AAAGGACTAA GACCGGTCTT GTGGTTAACA CCGGACTTTC CTCTTACGAC AGACGAGCTT TTACCGCTCC TCGACATATT AGCTAACAAG GTTAAAGCCG TTAGGAGACT CAGAGAGCTT CTCACAACTA AACTTCCACT AGGCACATTC CCTGTAAAGC TCGCCATTCC CATTATTCCA ACGGTTCGAG TTGTTGTTAC TTTCACAAAA TTTGAAGAGC TTCAGGCGGC TGAGGAGGAG TTCTCAACGC CTCCTTCTAG TCCGGTATTT CATGATGCAA AGTCTTCTTC TTCAGAGAAC TCATCACCAT CATGGATCTC ATGGATGAGA AGTGGCAAAT CAAGTGACAA TGATAGTAAC CGTTACAAAG ACGAGGTTGA CCCTTTCTTG ATACCTTCAG ATTACAAATG GATCGATTCA GCTGAGAAGA AACGTCGAAT GAAAGCTAAG AAAGCTAAGA GCAAGAGGAA GAAACAGGCG GCTACAAAAG CCGCTGGTGC TAGTGACTCG GGTACCCGTT CAAATCAAGT AGCCGAAGAA TGATGAGTCC TTAATCGAAT CATT 
Length1964
Protein Sequence
Protein Residue
Map Locationscaffold_3: 1410631.. 1412687
Download Sequence
A.thaliana
AGI-codeAT3G04470.1
DescriptionAnkyrin repeat family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.4641 Ahg479390
3.4641 Ahg478459 alfin-like 2
5.09902 Ahg470078 SEC7-like guanine nucleotide exchange family protein
5.65685 Ahg475538
6.32456 Ahg918979 splicing factor Prp18 family protein
9.16515 Ahg487631 dentin sialophosphoprotein-related
9.16515 Ahg480601 ubiquitin family protein
10.583 Ahg897056
10.6771 Ahg951066 1-deoxy-D-xylulose 5-phosphate reductoisomerase
12 Ahg496639 conserved peptide upstream open reading frame 40
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression