Detail



ID : Ahg478475

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478475|fgenesh2_kg.3__1176__AT3G11397.1
Sequence
ACACAAAACC TGAGAACCAA AACATCAGCA CAGAATCACT ACTCTAGAAA TTCGAATCCC AAATTAAAAT CCCAAGTTCG TTCTTCTTCG ATTTCACAGA GCAGATTATT GTATCTTATT GTGTCTTCGT AGTTTTTGAA AGAGAGAGAT GGATTGGGAC AGCGTTGCTG CCGAGGATGT GATCGAGGCG TTAAGAGAGG TCGAATGGTC GGCGAGTCCT CGTTCCTTGG CCGAGTTCTT CTCCAGATTC GCTTTTCCTC GCTCTTTCTC TAAATGGATG AGCCGTCTCA AATGCAATCT CTACTACTAT AGGACGAATT ACTTCATCCT CTTGATTTTC GTTCTGGGTC TTGCACTTAT CACTCGACCT CTGGCAATTC TTGGTGCTGC TATTACAGCT TTAAGCTTAG CTTTCCTTAA CGACAGTTTT GCAGCTACTT TTAATGAGAA GATGATCCGG ACCATTAGGC ATATCTCGCC ACATTTAGCT GCCAAGATGA GGCCTCCCCA CATGCCTGTC ATTCGTGGGC GATCTGCAAC TAGAAAGACA GTCTACATTT GTGGCCAACC TCGTTTGGTA TTCGTGTTGA TTGGCTTAAC CGCCAGTTTT GTTCTGTGGT TCACGTCCTG CGGTTTGTTA TGGGTCCTCT ATGCATTTAC CACTGCCATT CTCATGATAC TTCTTCACGC AAGCCTGAGA ACTCCAAACC TCAAGGCACG CTTGAACACA TTCCGTGAAG AATTCAGGGC TGTCTGGCGT AACTACAGCG AACTCTAAGT CAACAGGAAG CATTGATTGG ATCTTGACAT GAACTCCAAT GCCTTCCATC ATGTGCACAA ACACAATGGC AGTTATTATT GTCTTCTAGT AGTAAGCTAT AAGGCCACTT ATCTGATTAC AGATGCGGCT CTTTGTTCTA GTTAATTAAC TAGAACCACA AGG 
Length943
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4295689.. 4297699
Download Sequence
A.thaliana
AGI-codeAT3G11397.1
Descriptionprenylated RAB acceptor 1.A3
TAIR curator summary
Alias[PRA1.A3][prenylated RAB acceptor 1.A3]
Gene coexpression
MR
MR Locus Description
10.8628 Ahg492425 EMBRYO DEFECTIVE 140
15.2315 Ahg478298 RING/U-box superfamily protein
29.7489 Ahg931117 somatic embryogenesis receptor-like kinase 4
31.225 Ahg479795 emp24/gp25L/p24 family/GOLD family protein
32.619 Ahg313324 Mediator complex, subunit Med10
34.0441 Ahg474546 E3 Ubiquitin ligase family protein
36.4692 Ahg483334 vascular plant one zinc finger protein 2
37.3095 Ahg490694 Rer1 family protein
38.0657 Ahg900682 Ubiquitin fusion degradation UFD1 family protein
42.6615 Ahg354257 Tetratricopeptide repeat (TPR)-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression