Detail



ID : Ahg478298

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478298|fgenesh2_kg.3__999__AT3G09760.1
Sequence
ATGATCGATC AGATATCTCA ATTTCAGGAA CCCAGAAAGA GGGACTTGTC TTTTTCCTCC AAAGGGTTCC TGACGTTCGT TTCTTGCCTA CAATTTTTAG ATTCTTCTTC TCCTCTGCTT TTCTATTTTC TGGGAGCTCG ATGGTGGATG ATAAAGCTCG CCAACAAGAA GAACAACATG GGTCTCACCA ACATCATCAT TCTCCTCTGC AAATGGATGG AAATTCTGCT GAGATAGCAG AAGAACAAGA GCTATCATCA CCGGGCCGAG ACCTATGGAG GCGAGGTCTT GTGTTAGATT TACCATCAAC AACACCTCAA GATACTACAA GAGATGATCT TTTGAGACGA AATGCATCTC TAACTTCAAG TCCTGTTGCC AAAAGAGTCA ACTTTTCTCC AATGTCGAGC CCTAGAATCG GGCAACGTGC TGCATCCTTG AGTCCCTCCT CCTCTTCTTC GTCATCAAGA AACAAACCTA ATAGCCTGAA GAATCTAATC CCCAAGTTAA GCTTCAAGAA CCGGAACAGC AATAATGTGG ATATCGAGAA AGCCGCGGAG TTGGGCTTTG TGTCCTCCCC GTCTTCAGGA AATGGCAGGG ACAGGTCCAC ATGGACTCTC ACTAATATTT TAACTCCAAG ATTGAAGAAA ACTGAGTCTC TTCCTGTAAC CCCTATAGCT CACTCAAATC CTGAGTCCAC TCACGGGAGA TTTGCGGTTG ATCTAGTTAC TTCCACGAAA AAAGGGCCTC CACTGCCTAT CCACCGTTCA CGCTCTGTCC CAGCATTCAA CAAAGATGGA AGTCTAAGGC AATTAGGTGT TTTCCGGGTG ATTCCAACTC CAAACATGAC GCCAACCAGA AATACTATTA AACTTAACGA CGCGAATGTT GATGGCGCTG AAGATGTTCC TGAAGAAGAA GCTGTGTGTA GAATCTGCCT GGTAGAATTG GGAGAAGATT CAGAAGCCTT CAAGATGGAA TGTATGTGTA GAGGGGAACT AGCTCTTGCC CACAAAGAAT GTACAATCAA ATGGTTCACC ATTAAAGGAA ACCGCACATG TGATGTGTGC AAACAAGAGG TTCAGAATCT CCCTGTGACC CTTCTACGCG TGCAGAATTC TCGGGGTAGT ATTGGAGCTC CAGATACCGA GGCTGCACAC TACAGTTTAT GGCAGGATGT TCCAATTCTT GTCATTGTAA GCATGCTTGC ATACTTCTGT TTTCTCGAGC AGCTTCTGCT TACAAAAATG CAATCCGGCG CCATTGCAGT TTCTTTACCA TTCTCTTGCG TTCTTGGTCT CTTTGCTTCG ATGACGTCAA CAACAATGGT GCAGAAGAGA TATGTCTGGA TTTACGCCAC AACTCAGTTC GGTCTTGTTG TTTTTTTCTC TCACGTTTTC TTCACATTGG TTCGCATGCA GCCGGTTGTG GCCATTCTCT TAGCCACAAT TGTTGGGTTT GGACTCACCA TGAGCGGTAC AACAGGTCTA GTCGAGTTTT CAAAATGGAG GAGAAGCAAT AGGACAGCTG AACCTCCAAA CAGTAGTCAG GTGGATCAAC CATCGGTTGA GACAACAGAT CAGAGCATAT CTGGATCAAG AAACTGAAGC CAGAGGTCCT GAATACTAAT CATATGTTCC AGTAGCGGTG TATGGTATCG AATCAAGTAT ATCTATTTAG AGATGTGAGA ACAGATTGGT CATGTGAGTT AAGTAGTGAT AGTTGACGAG ATTAAGGCTC GATTTTGGGG GGTCTCTTTT GTGTGTGATT ATGAGTGT 
Length1778
Protein Sequence
Protein Residue
Map Locationscaffold_3: 3628297.. 3631135
Download Sequence
A.thaliana
AGI-codeAT3G09760.1
DescriptionRING/U-box superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.60555 Ahg485207 embryo defective 2423
13.9642 Ahg333080 RNA recognition motif (RRM)-containing protein
14.6287 Ahg920663 B-block binding subunit of TFIIIC
15.2315 Ahg478475 prenylated RAB acceptor 1.A3
19.7484 Ahg478034 GPI transamidase component Gpi16 subunit family protein
45.0333 Ahg922252 Amino acid permease family protein
48.6107 Ahg938705 INO80 ortholog
52.9339 Ahg477694 Plant protein of unknown function (DUF946)
53.2447 Ahg496077 GRAS family transcription factor
57.8014 Ahg921424 Protein kinase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression