Detail



ID : Ahg478612

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478612|fgenesh2_kg.3__1313__AT3G12560.1
Sequence
ACGTCTTCTT CCTTCTCTCT TTTCTAAGGA CAACGACGGA TTCTTACCGC AACAAAAAAA AAAAAATAAC TCGAGAATTC TTCATTTCTT TAAATCTCAG AATCTCGAGT TTCTGTATAG ATAGATGCTA ATTTGTCTTT GTACATTGTT ATACATAAAA CAAAATTCAA ATCGGGTATG GGGAAATTTG GGTTTTAGTT TGCGTGATCT GTAATAATAA GTGGTTCGCG ATCAAGAAAA CTGGTGGCTG ATAGTGATAT GCATATTTGA GAGATGGTGT TCAAGAGGAA GTTAGATTGC CGCTTTGATT TTCCCAATAT TCCCAGGGCT CCTCGTTCAT GCAGGAGGAA GGTCATAAAC AAGAGGATTG ATGATGACGA TGACACTCAG ATCTGTGCAA TTGACTTACT AGCTTTGGCT GGAAAGATTC TACAGGAAAG CGAGAGTTCC TCCGCCTCGT CCAATGCATT TGAAGGGAAT AATCACGATA AAGAAATTAA ACAAGAGCAA GATGATAAAT GCAAGCCTGT TAAATCTGAG TCTTCTGACC AAGGAAACTC TGTGTCAAAG CCTACTTATG AAATCTCTGC TGACAAGTGT GTGGTGAACA GTTTTTCATT TCCGGATAGT GACGGCGTTT TGGAGCGAAC TCCGATGTCT GACTACAAGA AGATTCATGG TTTGATGGAC ACGGGTGATG TTAATGTGAA TACTGGGTTT GAACAAGGAG AAGCTACTGA TTGCTTGGGA GATGGAGGCT TAATCACTGA CACTTGCAAC TTAGAGGATG CAACTGCGTT AGGTGTGCAG TTTCCGAAAT CAGTCTGTGT GGGTGGTGAT CTAAAATCAC CATCCAGCTT GGATATGACC CCTAATGGTT CCTATGCTAG ACATGGGAAT CATACTAACC TAGGTAGAAG AGATGATGAT GAAAATTTTT ATAGTTACCT GAAAGTTAGC AATAAATTTA AGTCGTATAG GTCTCCAACA ATTCGAAGAA TAAGAAAGTC GCTGTCGTCC AAATACTGGA AACAAGTTCC CAAAGATTTT GGACACAGTA GAGCTGATGT CGGTGTAAAG ACTCTCTATC GCAAAAGAAA ATCATGTTAT GGATACAATG CATGGCAGCG TGAGATCATT TATAAGAGAA GAAAGTCACC TGACAGAAGC TCGGTCGTAA CTTCTGATGG AGGACTCAGT AGTGGAAGTG TTTCCAAGGT ACCCGAGAAG GGAGATACAG TAAAGCTAAG CATTAAGTCC TTTAGGATTC CAGAGCTTTT TATTGAAGTT CCAGAAACTG CAACAGTAGG ATCACTAAAG AGGACGGTGA TGGAGGCTGT CAGTGTTTTA CTCAGCGGAG GAATACGTGT TGGGGTATTA ATGCATGGGA AGAAGGTTAG AGATGACAGG AAAACTCTGT CACAGACTGG GATCTCATGT GATGAAATTT TAGACAACCT TGGGTTCACC TTGGAGCCTG GTCCCAGCAA AGTTCCCCTA CCTTTGTGTT CCGAAGATCC TGCTGTGCCA ACCGACCCTA CGAGTTTGTC TGAACGGTCT GCGGCGTCTC CCATGTTAGA TTCTGGAATT CCCCATGCAG AGGACGTGAT TAATTTAGGA AATATTGTGG ACAGTAACCT CGAATTAGTT CCATATCAGG GGGACATATC TGTTGATGAA CCTTCATCGG ATTCAAAAGA GCTTGTTCCA CTTCCAGCCT TGGAAGTTAA GGCGCTTGCC ATAGTTCCGT TGAACCAGAA ACCTAAGCGT ACTGAGCTTG CCCAGCGCAG AACCAGGAGA CCCTTCTCTG TGACAGAGGT AGAAGCTCTT GTACAAGCAG TTGAGGAACT CGGGACTGGA AGATGGCGTG ATGTGAAATT GCGTGCTTTC GAGGATGCAG ATCATCGGAC TTACGTGGAC TTGAAGGACA AATGGAAGAC GCTTGTTCAC ACAGCAAGTA TATCACCGCA GCAACGAAGA GGAGAGCCTG TGCCACAAGA ACTCCTAGAC AGAGTCTTGA GGGCATACGG GTATTGGTCG CAGCACCAAG GAAAACATCA GGCGAGAGGA GCATCCAAAG ATCCAGAGAT GAACAGAGGT AGAGCTCTTG AATCAGGTGT TTCAGTGTAA AAAAAGGAGG TACGCATTGG TGGGTGGGTG TACAGAAGCA AACAACACAA TAAATCGAAA ACTCAATTTC TGCAAAGATT AATTGTCTTT ATTTCTCGTT TTTTTTTTTT TTTTCATTCT GCTTTGGCAT CTGTAAATGA CTCCAACTGG GATGAGATTC GTCCCTAACC AAATTTTTAG GTTCTATCTT TTTTTTTTTC GGTCCATACA AGGGATCTTG TAATTTTAGA CATTCTTTAT TGTTCT 
Length2376
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4747920.. 4751582
Download Sequence
A.thaliana
AGI-codeAT3G12560.1
DescriptionTRF-like 9
TAIR curator summaryEncodes a telomeric DNA-binding protein.
Alias[ATTBP2][TRFL9][TELOMERIC DNA-BINDING PROTEIN 2][TRF-like 9]
Gene coexpression
MR
MR Locus Description
10.9545 Ahg944763 calcium-binding EF hand family protein
17.4929 Ahg912460 Aluminium activated malate transporter family protein
23.4947 Ahg484373 Regulator of chromosome condensation (RCC1) family protein
23.9792 Ahg476534 TBP-associated factor 2
29.6648 Ahg350108
30.1662 Ahg490616 Protein phosphatase 2C family protein
30.7409 Ahg493844 ubiquitin conjugating enzyme 4
36.7423 Ahg471143 Zinc finger C-x8-C-x5-C-x3-H type family protein
38.8844 Ahg490488 TRAF-like family protein
48.734 Ahg918727 homolog of asparagine-linked glycosylation 12
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression