Detail



ID : Ahg490616

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490616|fgenesh2_kg.7__49__AT4G38520.2
Sequence
TCTTCTTCTT CCTCATCCGC TCGCTTATTT TTCTTTATTT TAATAATAAT AAAAATCATC GGTGTTTTAT ATAATTTCTT CTGGTTGGTT GATCCATCCG TTGTAGATCT ACAAACTCAG AAATTCCACG CCCACATCTT TCTCTTCATT CATTCTCTTG CTCTACTAGA GAGTAGATTC CCCATCCATC TTGCCAGGTA AAGTTTCCTT TTTTTTGGTA GCGAATACGA AAATCCTTTT GCTTTTTGTG TACTGTTTCT TGCTTGCCTG ACATCACTAA TTTTGCTCTC TTCCGATAAA GATGATAACT TTCCAATGTT GCATCGAATT TCTTAGATTG TTCAATCACT AGACTTTGTC TTTGACTTTT GGCATTGGAG ATTTCAGAAA GCTGTGAAAA ACTGACAAGT TCTATGTTGT GGTGGGAGAT TCGGATGAGA TGAGGGATGC TATCTGGGTT GATGAATTTT CTGAATGCCT GTCTCTGGCC ACGGTCAGAT CAGCAGGCAC GTTCAGCCTC CGACTCTGGC GGCCGCCAAG AGGGTTTGCT CTGGTATAGA GACTCCGCTC AGCACGTCTT TGGTGACTTC TCCATGGCCG TCGTTCAAGC CAACAGCTTG CTCGAGGACC AGAGCCAGCT CGAGTCTGGC TCTCTTAGCT CTCACGACTC TGGTCCCTAT GGCACCTTTG TTGGCGTCTA CGACGGCCAC GGTGGCCCTG AGACTTCTCG CTTCATCAAT GATCATATGT TCCACCACCT CAAGAGGTTT ACTGCAGAGC AACAGTGTAT GTCATCAGAG GTGATAAAAA AGGCGTTCCA AGCGACTGAA GAAGGGTTCT TATCCATAGT TACAAATCAA TTTCAAACTA GACCTCAGAT AGCCACTGTG GGGTCATGCT GTCTTGTAAG TGTCATCTGC GATGGGAAGC TCTACGTGGC CAACGCAGGT GACTCACGGG CCGTTCTGGG ACAAGTCATG AGGGTAACCG GTGAAGCTCA TGCCACTCAG CTCTCAGCCG AGCACAACGC ATCTATAGAG TCAGTGAGAC GGGAACTTCA AGCCCTGCAT CCGGATCATC CGGATATTGT GGTTCTGAAA CATAACGTCT GGCGAGTAAA AGGCATCATT CAGGTTTCAA GATCCATTGG TGATGTGTAT TTGAAACGGT CAGAGTTCAA CAGGGAACCG CTGTATGCAA AATTCAGGCT CAGGTCACCG TTCAGCAAGC CATTACTGAG TGCAGAGCCG GCGATCACGG TGCATACACT GGAGCCGCAC GATCAGTTCA TTATATGTGC TTCAGATGGA CTGTGGGAAC ATATGAGTAA CCAAGAAGCA GTAGACATCG TCCAGAATCA TCCGCGAAAC GGGATTGCAA AGCGGCTGGT GAAAGTAGCG CTACAAGAAG CGGCAAAGAA GAGAGAGATG AGATACTCAG ACCTGAAAAA GATAGACAGA GGAGTGAGGA GACATTTCCA CGATGACATA ACAGTGGTTG TTGTCTTCTT TGATACAAAC CTAGTGAGCA GAGGAAGCTT GTTGAGAGGA CCGGCGGTGT CAGTGAGAGG AGCGGGTGTG AATCTACCTC ACAACACATT GGCGCCTTAC ACCACGCCAA CGCAAGCTGC GGCTGGCGGC TCCTGATTTT ACGGTGTCCT TAAATTCTTT CCAAGATCTG TAACTATATA TATATATTTG ATTATCATTA TTATCATTAT TATCATTGAC TGGGAAAGGA TATCAAGTGG TTAGTTTTGT ATGTTCCCTT TGTTAGCTGT GGACTGGAGA AAGAAA 
Length1796
Protein Sequence
Protein Residue
Map Locationscaffold_7: 129391.. 131161
Download Sequence
A.thaliana
AGI-codeAT4G38520.1
DescriptionProtein phosphatase 2C family protein
TAIR curator summary
Alias[APD6][Arabidopsis Pp2c clade D 6]
Gene coexpression
MR
MR Locus Description
2 Ahg491217 coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative
11.0454 Ahg927082 Duplicated homeodomain-like superfamily protein
11.4891 Ahg323999 Structural maintenance of chromosomes (SMC) family protein
22.8035 Ahg912460 Aluminium activated malate transporter family protein
23.9792 Ahg487938 KNOTTED1-like homeobox gene 4
25.4165 Ahg483599 casein kinase II beta subunit 4
27.1662 Ahg494201 binding
27.2764 Ahg495675 oligopeptide transporter 1
30.1662 Ahg478612 TRF-like 9
31.4325 Ahg945962 calcium-dependent protein kinase 15
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression