Detail



ID : Ahg478632

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478632|fgenesh2_kg.3__1333__AT3G12700.1
Sequence
GAGAGAAAGG CGTTTCATCA ATGTCTATAA ATACTCTGTT TTGGAAACAG AACCCAGAAG GGGAAAAATG CAGAGAATCA AGACATCGCT CTCGTGTCTC TGTCTCATCA CGACGCTCCT CCTACTCACC GCCGCAGATT CCACGGAAGA CACGGCGGTG CGGCTAAAAT TAGCACACCG GGACACTCTC TGGCCGAATC CTCTCAGCCG CATTGAGGAC ATTATCGGTG CCGACCAGAA GCGTCATAGT TTGATATCTC GGAAACGTAA GTTCAAAGGA GGAGTTAAAA TGGATTTGGG ATCAGGGATT GATTACGGAA CGGCGCAGTA TTTAACGGAG GTTAGAGTTG GAACTCCGGC GAAGAAGTTC AGAGTAGTGG TTGATACAGG AAGCGAGCTT ACTTGGGTGA ATTGTAGATA CCGTGGGAGA GGCAAAGGTA AAGTTGAGAA TCGGAGAGTG TTTAGAGCTG AAGAATCTAA GAGTTTTAAA ACTGTTGGAT GCTTCACTCA GACTTGTAAA GTTGATTTGA TGAATCTTTT CTCACTCTCT ACTTGTCCTA CTCCTTCCAC TCCTTGCTCC TATGATTACA GATATGCGGA TGGGTCAGCA GCGCAAGGCA TATTCGCGAA GGAGACTATC ACAGTTGGTC TCACTAATGG TCGTAAGGCT AGACTCCGCG GTCTCCTCAT TGGTTGTAGT AGCTCATTTA GTGGACAGAG CTTCCAAGGA GCCGATGGGG TTCTTGGTTT AGCCTTTAGC GATTTCTCTT TTACTTCCAC AGCCACTAGT CTCTTTGGTG CCAAATTTTC CTACTGCCTC GTTGATCACC TCTCCAACAA AAACGTCTCC AACTATCTCA TCTTCGGTTC TTCCTCTTCC TCCACCTCCA CCAAAACCGC CCCGGGACGA ACCACGCCGC TTGATCTCAC TCTCATCCCA CCCTTCTACG CAATAAACGT CATTGGAATC TCCATCGGAG ACAACATGCT CGATATCCCC ACGCAAGTAT GGGACGCAAC TACCGGTGGT GGGACTATCT TGGACTCAGG AACTAGCCTC ACGTTATTGG CTGAAGCCGC GTACAAACCG GTGGTTACGG GGCTCGCACG TTACCTTGTT GAGCTGAAAA GAGTCAAGCC AGAAGGAATA CCAATTGAGT ACTGTTTTAG TTCCACGTCC GGGTTCAACG AGAGCAAGTT ACCGCAGCTG ACGTTTCATT TAAAAGGCGG TGCACGATTT GAGCCGCATC GTAAAAGTTA CCTAGTAGAT GCAGCGCCTG GAGTCAAGTG TTTAGGATTT ATGTCGGCGG GAACGCCGGC GACTAATGTG GTCGGGAATA TAATGCAGCA GAATTATTTG TGGGAGTTTG ATCTAATGGC CTCAACTTTG TCTTTTGCTC CCTCTACTTG CACTTAGCTG TCTTGTCCAT CTCTCTTCTG TTTATTATTA CTTTGATTGA TTGGAATATA TATATATATT GTTTTGTTAG TGAAAGAATA AAAAACATGT TTGTT 
Length1515
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4808438.. 4810459
Download Sequence
A.thaliana
AGI-codeAT3G12700.1
DescriptionEukaryotic aspartyl protease family protein
TAIR curator summary
Alias[NANA][NANA]
Gene coexpression
MR
MR Locus Description
11 Ahg945946 SKU5 similar 4
12.49 Ahg497154 FASCICLIN-like arabinogalactan 2
13.8203 Ahg482815 Laccase/Diphenol oxidase family protein
14.9666 Ahg914843 Protein kinase superfamily protein
18.8149 Ahg470654 Fatty acid desaturase family protein
22.5832 Ahg488793 Heavy metal transport/detoxification superfamily protein
23.8118 Ahg939416 PATATIN-like protein 9
23.8328 Ahg485969
24.454 Ahg483330 Basic-leucine zipper (bZIP) transcription factor family protein
25.5343 Ahg346489 RNA-binding (RRM/RBD/RNP motifs) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression