Detail



ID : Ahg478642

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478642|fgenesh2_kg.3__1343__AT3G12800.1
Sequence
CTTTTAGCGA ATTTGCGTGT GTGGTTATGG AGTCTCCGTT CAAACCTGAT GTCGTCAGAG GTCAAGTGGC TCTCATCACC GGTGGTGGAT CTGGCATCGG TTTTGAGATC TCTTCTCAGT TTGGCAAACA TGGAGCTTCT ATCGCTATCA TGGGACGCCG GAAACAAGTA CTCGACGACG CCGTCTCCGC TCTCCGATCT CTTGGAATTC AGGCTATTGG ATTGGAAGGT GATGTTCGTA AGCAAGAAGA TGCGACAAGA GTTGTGGAAG CAACTTATCA GCATTTTGGT AGAATCGATA TTCTTGTTAA CGCTGCTGCT GGGAATTTTC TGGCTGCTGC TGAGGATTTG TCTCCTAATG GCTTCAGAAC AGTCTTAGAC ATTGATGCGG TAGGAACATT CAACATGTGT CACGCAGCTC TCAAGTATCT TAAGAAAGGA GGGCCTGGGA GAGACTCATC AACCGGTGGC GGTTCCATTA TTAACATAAG CGCCACTTTG CACTACACAG CTTCTTGGTA TCAGATACAT GTATCTGCAG CCAAGGCTGC AGTTGATGCT ACAACAAGAA ACTTGGCATT GGAGTGGGGA ACTGACTACG ATATTAGAGT GAACGGGATT GCACCAGGTC CCATTGGAGG TACACCGGGA ATGAGTAAAC TTGTACCTGA AGAGATTGAA AACAAAACCA GAGAGTACAT GCCTCTTTAT AAACTTGGAG AGAAGTGGGA TATCGCAATG GCTGCACTCT ACCTCAGCTG TGATTCTGGG AAATATGTGA ACGGACTGAC AGTGGTGGTA GATGGAGGAC TGTGGCTTAG CAAACCACGC CATTTGCCTA AAGAAGCGGT GAAGCAACTC TCTCGTGCGG TGGAGAAGAG GTCTAGGGCC AAGCCTGTTG GTCTGCCGAC CAGCAAGCTG TAGATCATTT GGGTTTAAAT TGGTATTAAG ATCATGTAGA TCAAACTATG TTAAGCACAA TAAA 
Length984
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4835278.. 4836676
Download Sequence
A.thaliana
AGI-codeAT3G12800.1
Descriptionshort-chain dehydrogenase-reductase B
TAIR curator summary
Alias[DECR][SDRB][short-chain dehydrogenase-reductase B]
Gene coexpression
MR
MR Locus Description
5.65685 Ahg481139 peroxisomal NAD-malate dehydrogenase 1
8.60233 Ahg490469 Ubiquitin-like superfamily protein
16.0624 Ahg475761 Cytochrome P450 superfamily protein
21.3307 Ahg491854 regulatory particle AAA-ATPase 2A
25.4558 Ahg945645 Clathrin adaptor complexes medium subunit family protein
26.0768 Ahg919449 UDP-glucosyl transferase 71C4
26.4575 Ahg940290 mRNA splicing factor, thioredoxin-like U5 snRNP
27.7489 Ahg943249 ATP binding cassette protein 1
28.1425 Ahg944429 LYR family of Fe/S cluster biogenesis protein
29.2404 Ahg487803 actin 7
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression