Detail



ID : Ahg478647

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478647|fgenesh2_kg.3__1348__AT3G12860.1
Sequence
AAACCCTAAT TTCTCTGATT CTTCTCCGGG ACGGAAACTG CATAAATACT CGACTTTCAA TTCAATTTTT AAAAAGACGG CTAGGGTTTT TATAGCTTCT CTCTACAATG GCGATGTTTC TTCTTTCCGA ATCATCCTCC GGCTACGGAT TGTTCGAGGT ACACGGTCTC GATGAGATTG GACAGAACAC AGAGGCGGTT CGGAGCTCCG TCTCGGACCT AAGTCGGTTT GGGCGGGTCG TCCAGCTCAC TGCTTTTCAC CCATCTCAGT CTGCACTCGA TGCTCTTAAC CAAATCAACG CCGTCTCTGA AGGATACATG AGTGATGAGC TGAGGAGTTT TCTGGAGTTG AATCTCCCGA AAGTGAAGGA AGGCAAGAAG CCCAAGTATA GTTTGGGAGT GTCTGAGCCT AAAATCGGGT CTTGCATTTT TGAAGCTACA AAAATTCCTT GCCAGAGCAA TGAGTTTGTC CATGAGCTTC TTAGAGGTGT GCGTCAGCAT TTCGATAGGT TCATCAAAGA CCTAAAGCCT GGTGATTTGG AAAAAGCGCA ACTTGGACTA GCTCATAGTT ACAGCAGAGC AAAGGTGAAG TTCAATGTTA ACCGTGTGGA TAACATGGTT ATTCAAGCTA TTTTCCTACT TGACACACTT GATAAGGATA TCAATTCCTT TGCTATGAGA GTCAGAGAAT GGTACTCGTG GCACTTCCCT GAACTTGTCA AGATAGTCAA TGACAACTAC CTTTATGCCC GAGTTTCAAA GATTATCGTG GACAAGTCGA AGTTGTCTGA AGAGCACGTC CCTATGCTTA CTGAAATCCT GGGTGATGAA GATAAAGCAA GAGAGGTTGT TGAAGCTGGA AAAGCATCTA TGGGCCAGGA TTTATCACCG GTTGATCTGA TCAATGTCCA GAGCTTTGCT CAGAGAGTTA TGGACCTTGC CGATTACAGG AAGAAGCTCT ATGATTACCT TGTTACTAAA ATGAGTGACA TTGCTCCAAA TTTGGCGTCC TTGATCGGAG AGATGGTTGG GGCTAGGTTG ATTTCACATG CAGGAAGTCT GACAAATCTT GCCAAGTGCC CGTCTTCAAC TCTCCAGATT CTTGGTGCTG AGAAGGCACT TTTCAGGGCG CTGAAAACCC GTGGAAACAC ACCCAAATAT GGTCTAATAT TCCATTCGTC ATTCATTAGC CGTGCATCTG CTAAAAACAA GGGCCGTATT GCTCGTTTCC TTGCAAACAA GTGCTCCATA GCTTCCCGGA TCGATTGTTT CTCTGATAGC AGCACTACAG CTTTCGGTGA GAAACTAAGG GAACAAGTGG AGGAAAGACT TGACTTTTAT GACAAAGGTG TTGCCCCACG TAAGAATGTT GACGTAATGA AAGAAGTGAT GGAAAATCTT GAGAAGAAAG ACGAGGGAGA AAAAACAGTG GAGGCCTCAG AGAAGAAAAA GAAGAGAAAG TCAGAGGAGA AGGAGGAGGA GAAGGAAGAG GAGAAATCAA AGAAAAAGAA AAAGAAAAGC AAAGCAGTAG AAGGAGAAGA ATTGACAACA GAGAATGGTC ACAGTAAGAA GAAGAAGAAG AAAACTAAGT CACAAGATGA TGAATAA 
Length1607
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4866354.. 4868714
Download Sequence
A.thaliana
AGI-codeAT3G12860.1
DescriptionNOP56-like pre RNA processing ribonucleoprotein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.4641 Ahg942855 Ribosomal protein L6 family
9.74679 Ahg478626 CTP synthase family protein
10.8167 Ahg494257 Hyaluronan / mRNA binding family
13.4164 Ahg474417 Ribosomal RNA processing Brix domain protein
14.1421 Ahg928085 NOP56-like pre RNA processing ribonucleoprotein
14.5945 Ahg492264 fibrillarin 2
15.2971 Ahg482420 PIN domain-like family protein
16.2481 Ahg940355 DEA(D/H)-box RNA helicase family protein
18.0555 Ahg912319 homeobox protein 54
19.5704 Ahg496221 Anion-transporting ATPase
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression