Detail



ID : Ahg478626

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478626|fgenesh2_kg.3__1327__AT3G12670.1
Sequence
GAAGAAGAAG AAGCAGAGAC AAACGAATAT GAAGTACGTT TTGGTGACAG GAGGAGTGGT GAGTGGTCTT GGCAAAGGTG TCACTGCTAG TAGCATTGGA CTTCTTCTTC AAGCATGTGG TCTTCGTGTT ACTTCCATCA AAATTGATCC TTATCTTAAT ACTGATGCTG GAACAATGTC TCCGTTTGAG CATGGAGAAG TATTTGTATT GGATGATGGT GGAGAGGTGG ACTTGGACCT TGGAAACTAT GAACGATTTT TGGACAGTAC ATTGACCCGT GACAACAATA TAACAACTGG AAAGATATAC CAGTCAGTCA TTGACAAGGA AAGGAAGGGG GACTACCTTG GAAGAACTGT ACAGGTGGTT CCTCATGTTA CTGACGCAAT CCAAGAGTGG ATTGAGCGTG TAGCTAATGT TCCTGTGGAT GGGAAGGAAG GTCCTCCTGA TGTCTGTGTC ATCGAATTAG GCGGGACTAT TGGTGATATT GAATCTATGC CCTTTATTGA GGCCCTTGGT CAATTCTCGT ATAAAGTTGG GCCTGGTAAT TTCTGCTTGG TTCATGTCAG CCTTGTGCCT GTTCTCAGTG TTGTTGGTGA ACAGAAGACG AAGCCAACCC AGCATAGTGT GCGAGGACTC AGGAGCCTTG GTTTGACACC AAATATCTTA GCATGTCGCA GCACAAAGGC ACTTGAAGAA AATGTCAAGA CAAAACTATC TCAATTTTGC CATGTGCCGG AAGTGAATAT AGTAACGCTC TATGATGTTC CAAATATTTG GCATGTTCCG CTGCTTTTAA GGGATCAAAA GGCTCACGAA GCCATCCTAA AAGAGTTGAA CCTTAGTAAT GCTGTAAAGC CTGACTTGGC AGAATGGACT GCGAGGACTA AAATTTATGA CACACTGCAA GATCCTGTGA GAATAGCTAT GGTTGGAAAG TACACTGGCC TTACTGATTC TTACCTTTCT GTGTTGAAGG CCCTTTTGCA TGCTTCTGTT GCATGTCACA AGAAGCTTGT CATAGAGTGG GTTGCAGCCA GTGACCTTGA AGAGATAACT GCACAGGAGG CGCCAGATGT CCATAAAGCT GCATGGGATC TTTTGAAGGG TGCTGATGGT ATCCTAGTAC CAGGAGGGTT TGGTGATCGA GGAGTGCAAG GGAAGATACT TGCTACAAAG TACGCCCGTG AAAATCAAGT TCCTTTCCTT GGCATATGCC TGGGAATGCA GCTGGCTGTT GTTGAATTTG CCCGCTCCAT TCTCGGTTTT CATGATGCAA ACAGCACAGA GTTTGAACCA GAAACTTCAA GCCCTTGCAT CATATTTATG CCAGAAGGAT CCACAACTCA TATGGGGGGC ACAATGCGCT TAGGGTCAAG GAGGACTTAC TTCCAGGTTG CTGATTGCAA GTCTTCCAAG TTGTACGGTA ATGCAAAGTT TGTTGATGAG CGACACAGGC ACAGATATGA GGTAAATCCA GATATGATAT CAGAAATTGA GAAGGCTGGC CTCTCCTTTG TTGGGAAAGA TGAAACTGGG CGTCGTATGG AGATTGTAGA ACTACCAAGT CATCCATACT TTGTGGGTGC CCAGTTCCAT CCTGAATTCA AGTCCAGACC TGGGAAACCT TCTGCATTGT TTCTAGGTCT TATCGCAGCA GCGTCTGGGT GTCTAGAATC AGTTTTGCAA ACAGGTGGCA AGGTGAACAT AGTTTCGAAA AATGGAGTAG CCAATGGATC TGCAATGGGG AAAGCTCATC AGAACGGAAA TGTCTATAGC AATGGAAACG GGCTTCACCA CTGACTCGGG AAAGGAACAA TTTTACTTAC TGCACTTTTA AAGTTTTTCT GCTTTTAATC AAAGCTTTCT TTAAAGCCAG TCGACATGTA TAGTCCTTGA GTTTTGTTTC CTTGTCTTGC TTGAAGACTT GTTGGGTTTC GTTGTTAGGG TTTGGGGAGA GACATGGATA TGAATGTGCT TCCTGTTCTT GGGTTGCTTT TTGCCTTTCA TAGCTGAAAA GTAATAAAGA TCTATAATCT AGTT 
Length2044
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4791741.. 4795766
Download Sequence
A.thaliana
AGI-codeAT3G12670.1
DescriptionCTP synthase family protein
TAIR curator summary
Alias[emb2742][embryo defective 2742]
Gene coexpression
MR
MR Locus Description
9.48683 Ahg919175 protein arginine methyltransferase 10
9.74679 Ahg478647 NOP56-like pre RNA processing ribonucleoprotein
11.2694 Ahg485949 ribosomal protein L23AB
12.4097 Ahg478590 retinoblastoma-related 1
12.6886 Ahg912012 proteasome beta subunit C1
13.3041 Ahg478024 GTP-binding family protein
14.3527 Ahg902559 glycoprotease 1
16.6132 Ahg904129 Nascent polypeptide-associated complex (NAC), alpha subunit family protein
17.2916 Ahg904413 phosphoesterase
19.4679 Ahg932031 Pentatricopeptide repeat (PPR-like) superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression