Detail



ID : Ahg478672

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478672|fgenesh2_kg.3__1373__AT3G13040.1
Sequence
CGACGGCGAT TTCGTAGCCA AATCTTCGTC TTCTTCCTTT AACCCCATCT CTTCTTCTTC TTCGTCTTTT GCTTTCTCAT TCGGATTAAC TTCATCTCTT TGATGGGATT TTGCGTGTTT TCTCAGATGC TAGTTATTTT CTTCATTTGT TATGCAGCAA GTATAAAAAG TTGAAGACTT TATCATCCTC TCAGCGGCTT GAAGGCCAAC TCCAAACTTA TGGCGGATCT TATCAAGAGT CAGTTTTGTT TGTTGATGTT CATCAAAGCA ATCATGAACA GACATAGCCT TGTGTCAACG GCAACAGATG AATGCAACAA AGGAGTTGGT CAAACTTGCT CGACTTCTCC ATCTCCAGTC CATAACTTTC TCAATGTCCA GCCAGAACAC CGGAAATCTC CCTTCATAAG ATCACAATCT CCAGATTCAA CTGGTCAGCT ATGGCCAAAG AATATTTCTC AGAGCACTTT CTCTCGCTCT TCCACCTTCT GCACAAACCT CTACTTGTCA TCATCTTCAA CCTCTGAGAC TCAAAAACAT CTAGGAAACA GTCTTCCTTT CCTCCCTGAT CCCTCCTCTT ACACCCACTC AGCTTCTGGT GTGGAGTCTG CAAGATCTCC ATCTATTTTC AGTGAAGATT TGGGCAATCA ATGTGATGGA GACAACTCCG GCTCGCTTCT CAAAGATTTC CTTAATCTTT CTGGAGATGC TTGTTCCGAT GGCGGTTTTC ATGATTTTGG CTGTTCGAAT GACAGCTTTT GCTTATCAGA TCAAATGGAG TTGCAGTTCC TCTCTGATGA ACTTGAGCTG GCTATCACAG ACCGCGCTGA AACCCCCAGG CTTGATGAGA TCTATGAAAC GCCATTGGCT TCGTCAAATC CAGTGACGAG ATTGAGTCCA AGCCAAACCT GTGTTGCTGG AGCAATGTCT ATAGACGTAG TTTCATCGCA CCCTTCTCCG GGATCAGCAG CCAATCACAA GACGAGAATG AGATGGACTC CTGAGCTCCA CGAGTCTTTT GTTAAGTCGG TGATCAAACT TGAAGGGCCT GAAAAGGCCA CTCCAAAGGC TGTTATGAAG CTCATGAATG TTGAGGGCTT GACGATCTAT CATGTAAAAA GCCACTTGCA GAAGTATAGA CTAGCCAAGT ATATGCCAGA GAAAAAAGAA GAGAAAAAGA ATGAAAACTC AGAAGAAAAG AAACTGGCTT TGAGTAACAG TGATGCTGAC GAGAAGAAGA AAGGGGCCAT ACAATTAACT GAAGCTCTGC GTATGCAGAT GGAAGTTCAG AAGCAACTGC ATGAACAGCT CGAGGTGCAA CGGGTACTTC AGCTACGAAT TGAAGAGCAC GCTAAATACT TGGAAAAGAT GTTGGAAGAA CAACGCAAAA CCGGAAAGTT GATTTGTTCT TCTTCTTCTC AGACAGTATT ATCACCTAGT GATGACTCTA TATCAGATTC TCAAAACATG TCCAAAACCG AAGCATCTTC GCCTCAGCGG TCAACATCTG CAAAGAACAA AGCTTCTGAA ACTGAAGACG ATAAATGTGA AAGCCCTCAA AAACGTCGCA GGCTTGAGAA CAAAGCTGAA TCTGAAGATC CTAAGAGGTA GGAAGATGCT TCAAGTATGT AAATATGGTA TGTTTTGTGT GATATGGTGA GAGAGATGGT GGTGATCATT CAAAGTATAT GTTTGTAATG TAGATCTTTG TCGGAAACGT GTAAACGTAT TACGAATCTT GAGGATGTTC CTTTCATAAA CATATGATGC ATAGAACCCG AAATCCCTGA TTTTGTGAGT AGATCACTTG TTAGTGTGAA AAGTGAAGGA TTCACTTTCC AATCTTCATA GGGTTTGCTA ATATCAAAAG TGGATGTCAC TTTCC 
Length1885
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4957146.. 4960440
Download Sequence
A.thaliana
AGI-codeAT3G13040.1
Descriptionmyb-like HTH transcriptional regulator family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
10.9545 Ahg932734
16.7332 Ahg487253 F1F0-ATPase inhibitor protein, putative
16.7332 Ahg929332 metallothionein 3
18.4932 Ahg480722 conserved peptide upstream open reading frame 1
26.3818 Ahg491400 gamma vacuolar processing enzyme
28.2489 Ahg475455 shaggy-like kinase 42
28.8791 Ahg946563 glycosyltransferase family protein 28
29.7489 Ahg932476 Protein kinase superfamily protein
33.2566 Ahg925479 chloroplast ribosomal protein S14
34.2053 Ahg470409 TRAF-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression