Detail



ID : Ahg478729

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478729|fgenesh2_kg.3__1430__AT3G13450.1
Sequence
ATGGCAGCTC TTGTACGCAG ATTGTGCCGG CGATCGTATA TTCCGGTCTC TGGTCCTGGA TATAGGATGC TATCGACGAT TGAAAATGTA TCTGAAAATG GTAAATCGAT GAATCTGTAC TCTGCTATTA ATCAAGCTCT TCACATCGCT TTAGAGACCG ATCCTCGGTC TTATGTGTTT GGGGAAGATG TTGGTTTTGG TGGTGTGTTC CGATGTACAA CCGGATTAGC TGAACGTTTT GGGAAATCTC GAGTTTTCAA CACTCCTCTC TGCGAGCAAG GCATTGTTGG CTTTGGCATT GGTTTAGCTG CTATGGGAAA TCGAGTTATT GCGGAAATTC AGTTTGCGGA TTATATCTTC CCTGCTTTTG ATCAGATTGT TAATGAGGCT GCAAAGTTCA GATACCGAAG TGGAAACCAG TTTAACTGTG GAGGACTTAC AATTAGGGCA CCGTATGGAG CCGTTGGTCA CGGTGGACAT TACCACTCAC AGTCCCCTGA AGCTTTCTTC TGTCATGTCC CTGGTATCAA AGTTGTTATT CCTCGAAGTC CACGGGAAGC TAAGGGATTA TTATTGTCAT CCATCCGTGA TCCGAATCCC GTTGTCTTTT TCGAACCAAA GTGGCTATAT CGTCAAGCGG TAGAGGATGT CCCTGAGGAT GACTATATGA TACCTTTATC TGAGGCAGAG GTTATACGAG AAGGTTCTGA CATAACACTT GTTGGATGGG GAGCACAGCT CACTATCATG GAACAAGCAT GTCTTGATGC AGAAAACGAA GGCATATCGT GTGAATTGAT AGATCTCAAG ACTCTGATCC CTTGGGATAA GGAAATCGTT GAGACCTCAG TGAGAAAGAC TGGCAGACTT CTTATTAGCC ATGAAGCTCC TGTTACAGGA GGCTTTGGGG CAGAGATCGC TGCAACTATA GTTGAGCGTT GCTTCTTAAG GTTAGAAGCA CCTGTAAGCA GAGTTTGTGG CCTGGACACT CCTTTCCCTC TAGTGTTCGA ACCTTTCTAC ATGCCAACCA AGAACAAGGC AAGTTTTATA TTGGATGCAA TCAAATCAAC TGTGAATTAC TAGCCCTTCT TAGCATTGTA CACATTCTCT GATTCTCAGT CTCCTATCTT CGAAATAGTG ATTGATGTTA GTGGTTCATA CATGTAATGT ATGATCTTGA AACTCTCCAT CTTTGTTC 
Length1198
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5177993.. 5180110
Download Sequence
A.thaliana
AGI-codeAT3G13450.1
DescriptionTransketolase family protein
TAIR curator summarybranched chain alpha-keto acid dehydrogenase E1 beta
Alias[DIN4][DARK INDUCIBLE 4]
Gene coexpression
MR
MR Locus Description
5.74456 Ahg480566 Pentatricopeptide repeat (PPR) superfamily protein
9.16515 Ahg945888 Protein of unknown function DUF106, transmembrane
11.8322 Ahg475863 Lojap-related protein
15.3948 Ahg492913 VPS54
20.5913 Ahg920663 B-block binding subunit of TFIIIC
31.6228 Ahg472914
42.19 Ahg476896
42.4264 Ahg476134
47.4974 Ahg893505 NAD(P)-binding Rossmann-fold superfamily protein
47.9062 Ahg893068 embryonic flower 1 (EMF1)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression