Detail



ID : Ahg920663

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|920663|scaffold_101944.1
Sequence
TACCTTTTGG ATGATGAGAA ATGGATTCGA TTGTATGCAC AACACTGGAG GAAATCTGTT GTCAGGGAAA TACAGGGATC CCTCTCGTTT CTCTCTGGTC AAGGCTCTCT CCTCCTCCTC TTTCTCCTTC CGTCAAGGCT CATGTCTGGA GAAATCTTCT CGCCGTCCCT CAGCTCCAGT TCAAGGCGAA GAACACTGTG TACGAACCGT CTCATGCTTC CATTCAACAG CTGGAAGAAG CATTAAGACT AGATTTGAGA ATCGTCGCAA ATGAGAAGCT CCGAGGTAAC TTCGTGGGCT TGTACGATGC TCAGTCCAAT AACACGACTA TTTCCGCTAT TCAGCGTCGT GTTCTTGAGC GGCTTGCTGT TGCTCGAGCC AATGGAGTTG CACAAAATCT GCTTGCTAAA GAGTTTGGTA TCGAAGGTAG GAACTTCTTC TATATTGTGA AGCACCTTGA GTCTCGAGGT TTAGTTGTTA AGCAACCAGC GATTGTGAGA ACAAAGGAAG TTGATGGCGA AGGGGATTCC AAAACCACTT CATGCAATAG CACCAACATG ATTTACTTAA GTCGTTACGC CAAGCCTTTG GGTTCTCAGC AGAGGTTTGA AATTTGCAAA GAGGACTCTT TGTCGGAAAC ACCAATGATG GAGCATGAGC CTACTCCAGC CGGAGATAGT CTACTATCTG AAAATACAAA AGAGGATACG CTCATTAAAG ATTTTCTACC AGCAATGAAG GCAATTTGTG ATAAGCTTGA AGAAGCTAAC GAGAAGGTTC TAGTCGTCTC GGACATTAAG CAAGACCTTG GTTATTTGGG ATCACATTCA AGGCATAGAG CTTGGAGAAG TGTTTGTCGC CGGTTGACAG ATTCTCATGT AGTAGAGGAG TTTGATGCTG TGGTGAACAA TAAGGTTGAA CGATGCCTCC GTTTGTTAAA AAGATTTTCA GAAAAAGATT TTAATAACTA CTCTGGGAAA AAACAACTCC TAAAATTCGG AAGGAGTATT CAAAGAACAG AACAAACTTT GGAGCTTCCA ATAGATAATC AAATTTATGA TATGGTTGAT GCTGAAGGAT CGAAAGGCTT GGCTGTGATG GAGGTATGTG AAAGACTTGG AATTGACAAG AAGAAGAGCT ACTCTCGGCT TTATAGTATA TGTTTAAGAG TCGGGATGCA TATACAGGCA GAAAGCCACA AGAAGACTAG AGTATTTCGT GTTTGGACTT CTGGTAATGC TGGGTCCGAG TGTTCTGATC TGTTTCCTGA GAAAGTTGAA AATCGTAGCT GGGAAAATAA TGTATCGACT AATGATTTTG GCACACCTCA TGATACTGGT GGATTGGCTC AGACCTCCAT CGAACACAGT CTTGCAATTT CTGATGCTGA ATTTGCTACA CCTGCAAGGT TAACTGATTC TGAAAACAAT TCAGGAGTTC TCCACTTTGC TACACCTGGA AGGTTAACTG ATTCTGAAAG CAATTCAGGA GTTCCTGATT GTTCTCCATC TAATGCGAAA AGAAGAAATG TCCTTACACG CCGTAACTTA CAAGAATCAT TCCATGAGAT CTGTGATAAG GTTGTTAATA CTGCAATGGG GTCCCCTGAT TTGGCTTTGT CAGAAACGAA CCATCTCGCT CTACCGAAGC CAGCTAAACC GAAGGTGCAC CAACCTCAGC CGATTACTGT TGAAAACTCT CGAAGAGAGC GGAGAATACT TGAGCGCTTA AATGAGGAGA AGTTTGTTGT AAGAGCCGAG CTACATAAAT GGCTGCTCAG TCTTGAGAAG GACAGGAGCT CCAAAGTGGA TAGGAAAACC ATTGACAGAA TTCTAAACAG GCTTCAAGAA GAAGGACTCT GCAATTGCAT GAACATTAGT GTCCCAAATG TTACTAATTG TGGTCGCAAT CGTAGCTCTG TGGTAGTTTT TCATCCATCT GTTCAAAGTT TGACTCGGGA CATAGTTGGT GAAATTCATG ATAGGATTAG GTCTTTTGAA CTGGGACTCC GTGGCCAGAA CTTATCGAAG AGGAAAAGCA ACGAGCTAAT TCCAATATTG AATGACGTTC AGAGAGGTCA AACAAATGTA GATTTGGATG CGCGTGCTAG CAAATCAGGA GCCATGCGAG CCAATGGGTT TGTGCTTGCA AAGATGGTTC GTGTGAAGCT CCTACATTGT TTCCTTTGGG ACTATTTTAG TTCTTTGCCT AGCTGGGACA ATGCTTTTTC GTCTATACAT GATCAGAAAT TTGACAATTT GTTTGCACTT GAAGATGCTT TTAAAGCCAT GCCACTCGAA CTATTTTTAC AAGTTGTTGG ATCTACTCAG AAAGCCGATG ATATGATGAA GAAATGCAAA CAGGTTATGC GTCTTTCTGA GCTTCCTGGC GAAGAGTATA AGCTTCTAAT GGATACTCTT GCAACTGGGA GATTATCGAT GCTTATTGAT ATCTTACGCC GGTTGAAGTT GATTCAGATG GTAAGCAGTA GACTCAGACG CGATGAAATT GAGGAGAAGT ATGCTAATCT AACCCATGCA ATGGAGCTTA AGCCCTATAT AGAGGAACCT GTGTTTGTTG CTGCTACATC CAATGTTATG TCTCTTGATT TTCGTCCACG TATTCGGCAT GACTTTATTC TATCAAATAG AGATGCTGTT GATGAATACT GGCTAACTTT AGAGTATTGC TATGCTGCTG CCGATCATAG AGCTGCTAAG CTAGCATTTC CGGGATCTGT TGTTCAAGAG GTTTTTCGTT TCCGCTCTTG GGCCTCAGAT CGTGTCATGA CAACAGAACA GCGTGCTAAG CTCTTACAGC GCATTGCAAT CGATGAGAAG GAAAAACTCT CATTCAAAGA ATGTGAGAAG ATTGCTAAGG ATCTGAACCT GACCTTAGAG CAGGTTATGC ATGTCTATCA TGCGAAGCAT GGAAGACGCG TGAAGTCCAA ATCAAAAGAT AAAAATTTTG CTATAGATAA TAGCCCTTCT TCATCTTCCG GGAAAAGAAA AAGAGAAACT ATCGTAAAGA CTACAGGAGA AGGTGTCAGA TCCATAATAG TAGATGAAGA AAAGGTTCTG AATTCAGATG CCATTAATGC CTCAAATAGT GAGAATTTTC AAAATTCATT AGAAGAGGAC CAAACCCCCA TTCCGATGCA TCAGGAGCAT AATCTACAAG AAAATGCAGA GATAAGGGAT CTTGCTGAAG ATGAAGGCCA GTGTTCTTCT ATTATCAACC AGTACGCAAG TTCAAAGACC ACAGCAACTC CTTCACAAAG ATTTTCGTGG ACAGATGAGG CAGACAGGAA ATTGTTGAGT CAATATGTTA GACACCGCGC AGCTCTTGGG GCGAAATTTC ATGGAGTAAT CTGGGCTTCA GTTCCAGAAC TGCCTGCCCC ACCTTTAGCT TGCAAGCGAC GGATTCAAAT ATTGATGAAG AATGATAAAT TTCGGAAGGC GATCATGAGG CTTTGCAATC TGCTCAGTGA GCGTTATGCA AGACATCTAG AGACGAAACA GAAGTGTTCA CCCGAGAGCA ACAGGTCACA TGTTCTTGTT AGATATTTAT CCCCGGCGAT TGGCGGAACG GATTCTGGTT CTGTTGAGCA TGGTAAAGAT ATATGTTTTG ATGAAGAAAA ATGGGATGAC TTCAATGAAA AGAGTATAAG TCAAGCCTTT AATGATGTTC TTGATCTCAA GAAGATGGCT AAACTGGTGG CCCCTAAACG GACGAAGCCT GGCTCTCGGG AATGGTCAAA CAGAGATATA GTTGATGAGG GGAGTGATAT GGTTCCACCT GCGATTCACT CAGAGGACAT TCAAAATGTG ACTGTGGATC AAGTTAAAGA TACAACTCGA CGATCTGGAC ATTATCGTCT TCATCAAACT ATTAAGCCTT TAGATGAAAA GGACAACGGT AGTATACAAG TACGGAAATC TCTGGCAGTT TCTACTGCTG CAGAACTGTT AAAGCTTGTC TTTCTGAGCA TGCCTACTGC ACCTGGTATG CCAAATTTGC TGGAAGATAC CTTAAGACGT TATTCAGAGC GAGACCTCTT TACAGCCTAT AGCTACCTCC GAGACAAAAA ATTCCTGGTT GGTGGAAGTG GTGGACAGCC ATTTGTGCTT TCTCAAAACT TCTTGCATAG TATTTCGAAG TCTCCATTCC CAGTTAATAC TGGGACAAGA GCAGCCAAGT TTTCCAGTTG GCTTCTCGAA CATGAAAGAG ACCTTATGGC TGGGGGAGTC GCTCTTACTT CAGATTTGCA ATGTGGCGAT ATTTTAAATT TCTTTTCATT GGTTTCTTCT GGTGAACTTT CTATATCTGT ATCCTTGCCT GAAGAAGGTG TTGGAGAGCC TGGAGATCGA AGAGGTTTAA AACGTAGAGC TGATGACATA GAAGAATCTG AAGCTGATAG TGCTAAGAAA TTAAAGCTAC TAGGTGAAGG TGAAATCAAC TTCCGAAAGG AAAAGGGTTT CCCTGGTATA GCAGTATCTG TTTGTCGTGC AACTCTACCA ACAGCTAATG CAATAGAGTT GTTTAAGGAT GATGACTCTC GCACTGGTGA ACTTCATTTC AAGTGGAGAG AAACGAATAG TGGCTCTGAT TCTGATGACA TGAAAGAACT TTTCAACTCT ACAGGTTCTA CTGTCATACC AAGCAGTCTA GGTGATTCTC CATGGCAAGC GATGGCCAAT TTTACTAGTA GTATTATGTC CGAATCAGCA GATGAGGAAG TGAGTTTATT CAGGGTTTTT GAAACGGTTT CCAATGCCCT TCAGAAGGCT GGTGACCAAG GTCTGAGCAT TGAAGAAGTC CACCGTCTTA TTGATATCCC AAGCCAAGAA ACTTGTGACT GCATTGTAGA TGTACTTCAA ACATTTGGGG TAGCTTTGAA GGTAAATGGC TATAATAATT TCTGTGTTGT CCATTCCTTC TACCGATCAA AGTACTTCTT GACATTGGAG GAGGATGGAA CTTCCCAAAA AGGTCAACAG TCTCTACCAG TGAACTACCT AGAGAGAGCT GTTGGGGAAC ATAGGTCAAA AGATGTTATT TCACAGGACG AGCGAGAGCA TGTCGCTGGG AATAGCGTTC ACAAGGTTAC TATTCTTAAC CTTCCTGAAA TGGCTCAAAC GAGCTGTTTG CACGAAGCAT CTATCAAAGC TCCATCTGTT ACTTTTGGAA CGGGTATCGA AGGTGAAACA AAGGAATCAA CTTCGGAGAA GTCACCTGTG CCTATATTTC CATGGGTAAA CGCAGATGGG TCAATAAATA AAGTTGTATT TGATGGACTA GTTCGCCGTG TTCTTGGTAC CGTGATGCAA AATCCCGGTA TACCAGAGGA CGAGATAATA AACCTAATGG ACATACTAAA TCCTCAGAGC TGTAGAAAGC TTCTGGAGTT GATGACACTG GACGGGTATA TGAAAGTGAG GGAAATGGTG CAAACCAAAT TCACCGGTCC TCCGTCTCTG TTAGCCGGTC TTGTTTCAAC AGGTCCTAGT AAACCGGAGC TTATCCGCCG CAAACACTTG TTTGCCAACT CCAAGGGACT CTTTGCCTTG TAATATTTGT AAAATCTCTC TGTC 
Length5594
Protein Sequence
Protein Residue
Map Locationscaffold_1: 6974105.. 6982442
Download Sequence
A.thaliana
AGI-codeAT1G17450.2
DescriptionB-block binding subunit of TFIIIC
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.41421 Ahg494356 ornithine-delta-aminotransferase
7.07107 Ahg477381 SIN3-like 1
8.48528 Ahg472338 squamosa promoter binding protein-like 14
8.83176 Ahg932741
9 Ahg472652 gamma-adaptin 1
10.583 Ahg349401 Protein of unknown function (DUF1423)
14.4568 Ahg945493 pumilio 6
14.6287 Ahg478298 RING/U-box superfamily protein
15.5885 Ahg481586 ETHYLENE-INSENSITIVE3-like 1
16.4317 Ahg474368 UDP-Glycosyltransferase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression