Detail



ID : Ahg478832

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478832|fgenesh2_kg.3__1533__AT3G14180.1
Sequence
AAACCGAGCC GGCAACTTTA CCGGTGACGG AATCTTACCT CTGACCTACC AATCACGTTA TTCCACGTCA ACTCCCCGTA TCTTCTCACG TTCTTCCACG TGTCTCTCCT ACTCACCGAC GCCGTCTCCT TCCCGTTTAC CCCCCTCCCG AACAGAATAT TAACCCAAAC CCTAACCCTA TCTCCTCTTT CACGAGCTTC TGACTCAGAT CCGGCGATAT CGAATTCCAT GGAGGACGAC GAAGACATCC GATCTCAGGG TTCCGATTCA CCTGATCCGT CTTCTTCGCC GCCGGCGGGA CGAATCACGG TTACGGTGGC TTCGGCAGGT CCGCCTTCTT ATTCTCTGAC TCCTCCGGCT AGTTCGTCGC AGAAGGATCC GGATGCGTTG GCTCTGGCGC TGCTTCCGAT TCACGCCAGC GGTGGAGGGA ATAGCAGCAG TGGGAGACCA ACCGGTGGCG GCGGGAGGGA GGATTGTTGG AGCGAAGGGG CTACGGCTGT GTTGATTGAT GCGTGGGGTG AGAGATACTT GGAGCTTAGC AGAGGGAATC TGAAGCAGAA GCACTGGAAA GAGGTGGCTG AGATCGTGAG CAGCAGAGAG GATTATGGTA AAATTCCCAA AACTGATATA CAGTGTAAGA ATAGGATCGA TACGGTGAAG AAGAAGTATA AACAGGAGAA GGTGAGAATC GCTACCGGTG GTGGCCGTAG CAGATGGGTG TTCTTCGACA AACTTGACCG TCTGATTGGA TCAACGGCGA AGATCCCGAC GGCAACTCCT GGAATCAGCA GTGGTGGAGG TCCTGTAGGA GGATTGCATA AGATTCCTAT GGGTATTCCC ATGGGAAATC GTTCGAATCT GTACCACCAG CAAGCTAAGG CTGGAACACC GCCTTTCAAT AATATTGACC GTCTAATTGG AGCTACGGCT AGGGTCTCAG CTGCTTCGTT CGGTGGCAGT GGTGGAGGAG GCGGAGGAGG ATCTGTTAAT GTACCTATGG GAATTCCGAT GAGTAGCCGT TCAACTCCGT TTGGACAGCA AGGTAGGACG CTGCCACAGC AAGGTAGGAC GCTGCCACAG CAACAGCAGC AAGGGATGAT GGTGAAAAAG TGTAGTGAGT CGAAACGCTG GCGTTTCAGG AAGAGGAATG CCTCTGATTC AGACTCGGAA TCTGAAGCAG CAATGTCAGA TGATTCCGGT GACAGTTTAC CTCCTCCTCC TCTTTCGAAG AGGTTGAAGA CAGAGGAGAA GAAGAAGCAA GATGGTGATG GAGTGGGAAA TAAATGGAGG GAGTTAACTC GGGCAATCAT GAGATTTGGT GAAGCTTATG AGCAAACAGA GAATGCGAAA CTGCAACAGG TGGTTGAGAT GGAGAAAGAG AGGATGAAGT TCTTGAAGGA GCTGGAGTTG CAGAGAATGC AGTTCTTTGT TAAGACCCAA GTGGAGATAT CGCAGCTTAA GCAGCAACAT GGGAGGAGAA TGGGAAACAC CAGTAATGAT CATCACAGCC GCAAGAACAA CATCAATGTG ATTGTCAACA ACAACAACGA TTTGGGTAAT AACTAGAGTT TAGTGATGCA GGGTCGTAAT TGATATATTT TAGATTTGAG TCTTGAATTG TTGAAAGAGA GAACTGAAAC TTATCTAGGC TTCATGCGTG TATTAATATT TTGCATATCT TTGTTAACTT TTGTCATATG GAACAGATTT AACATCACTA GAATGCATGA GATCATCCTG C 
Length1741
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5563531.. 5565239
Download Sequence
A.thaliana
AGI-codeAT3G14180.1
Descriptionsequence-specific DNA binding transcription factors
TAIR curator summary
Alias[ASIL2][Arabidopsis 6B-interacting protein 1-like 2]
Gene coexpression
MR
MR Locus Description
1 Ahg476410 Homeodomain-like/winged-helix DNA-binding family protein
3.16228 Ahg949711 hydroxyproline-rich glycoprotein family protein
3.74166 Ahg491031 armadillo repeat only 3
3.87298 Ahg939070 ARABIDILLO-2
5.47723 Ahg938412 plant U-box 14
8.48528 Ahg478603 nuclear factor Y, subunit C11
10.3923 Ahg349401 Protein of unknown function (DUF1423)
12 Ahg478277 Lung seven transmembrane receptor family protein
13.1909 Ahg488148 ARF GTPase-activating protein
13.6015 Ahg893389 Alg9-like mannosyltransferase family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression