| Annotation |
|---|
| Description | jgi|Araly1|488148|fgenesh2_kg.6__1282__AT5G13300.1 |
| Sequence |
CCCCCACTGT TTTCTTGTTC TGTTCTCTCT CGATTTCGCG AGAAAAACAC CAGCTCAAAA TTACGCTTGG CTCGAGACTC TGAAGATCAT CGGGTTCTGT TTTTTTTTTT CTTTTTTTGT AGATATTTTG AGGAGAGGAT CTCATCGTTT GTCTGTGTGA GAAAATAGTG GTGGTTTTAG CTTTTTAGGT TTTTGTTAGT GTGTGTTCGT GTCGTGTGAT GTTAATTGCT GTTTGTGTCG AAGAAGAGGA AGTAAGAATT AGCTCAAAAT GCATTTCACT AAGCTTGATG ACTCTCCCAT GTTCCGCAAA CAGTTACAAA GCATGGAGGA GAGTGCAGAA ATATTGAGGG AAAGAAGTCT CAAGTTTTAC AAAGGATGCC GGAAATACAC TGAAGGACTA GGCGAGGCAT ACGATGGGGA CATTGCTTTC GCAAGTGCAC TGGAAACATT TGGTGGAGGC CATAATGATC CAATAAGTGT TGCTTTTGGA GGACCTGTAA TGACGAAATT TACAATTGCC TTGAGGGAAA TTGGGACTTA TAAAGAAGTT CTTCGGTCAC AGGTGGAACA TATACTGAAT GACAGATTAC TTCAATTTGC CAATATGGAC TTGCATGAAG TTAAGGAAGC TCGGAAGCGC TTTGATAAGG CTAGCCTTAC CTACGATCAG GCCCGTGAGA AGTTTTTATC TTTGAGGAAA GGTACAAAAA GTGATGTTGC TGCTGCTTTA GAACAGGAAC TTCACACTTC AAGGTCTATG TTTGAGCAAG CTCGGTTCAA CCTTGTGACT GCTCTTTCAA ATGTTGAAGC TAAGAAAAGG TTTGAATTTT TGGAAGCAGT CAGCGGAACG ATGGATGCAC ATCTTCGGTA CTTCAAACAG GGTTACGAAT TACTGCATCA GATGGAACCA TATATCAATC AGGTCTTGAC CTATGCACAA CAATCCAGAG AAAGATCAAA TTATGAACAA GCAGCACTTA ATGAAAAGAT GCAGGAGTAC AAAAGACAGG TTGATCGAGA GAGCAGGTGG GGTTCAAATG GTTCTAATGG ATCACCAAAT GGAGATGGCA TACAAGCGAT CGGTAGAAGC TCTCACAAAA TGATAGACGC CGTAATGCAA TCTGCTGCAA GGGGGAAGGT TCAAACAATA AGGCAAGGTT ATCTCTCTAA ACGATCTTCA AACCTGAGAG GAGACTGGAA AAGAAGGTTT TTTGTTCTTG ACAGCCGGGG AATGCTGTAT TATTACCGAA AACAGTGTAG CAAACCATCT GGGTCTGGCA GCCAGCTTTC TGGACAGAGA AATAGCTCCG AGCTTGGGTC TGGACTTCTT AGTAGGTGGC TTTCTTCGAA TAGTCATGGA CATGGTGGTG TCCATGATGA GAAGTCTGTA GCTCGTCATA CAGTGAACTT ACTCACCTCA ACAATTAAAG TCGACGCTGA TCAATCAGAT CTGAGGTTTT GCTTTAGGAT CATTTCACCT ACAAAAAACT ACACGTTGCA GGCTGAGAGT GCACTCGATC AAATGGATTG GATAGAAAAG ATCACTGGGG TTATTGCATC ACTACTTAGT TCTCAGGTCC CTGAACAGCG TCTTCCTGGT AGTCCCATGG GAAGTGGTCA CCATCGATCT GCTAGTGAAA GTAGCTCATA TGAAAGTTCT GAATATGATC ATCCTACTAC TGAAGAATTC GTATGTGAGA GGAGCTTTTT GGGGTACCAT GAAAGGCCAT CAAGAAGTTT TCAGCCGCAA AGGTCCATTA GGAAGGGTGA GAAGCCCATT GATGCTCTAC GAAAAGTCTG TGGGAATGAC AAATGTGCGG ATTGTGGAGC TCCAGAACCA GATTGGGCTT CTTTAAATTT GGGGGTTCTT GTCTGTATCG AATGTTCTGG TGTTCACCGT AATCTTGGTG TGCATATATC TAAGGTTAGG TCACTCACTC TCGACGTGAA AGTATGGGAG CCATCTGTTA TAAGTTTGTT CCAAGCTCTT GGAAATACTT TTGCAAACAC AGTTTGGGAG GAATTGCTTC ATTCAAGGAG CGCCTTCCAT GTTGACCCAG GCTTAACTGG GTCTGATAAA TCCAGGGTGA TGGTCACTGG AAAGCCCAGC TATGCTGATA TGATATCTAT CAAGGAGAAG TATATTCAAG CTAAGTATGC GGAGAAGCTA TTTGTTCGGA GATCAAGAGA CTGTGATTTC CCACAATCAG TTGCACAACA AATGTGGGAC GCAGTGAGTG GCAATGATAA AAAAGCTGTT TACCGGCTTA TTGTCAATGG TGATGCGGAT GTAAATTCTG TGTATGACCA ATCATCTTCC AGTTCTTCTT TAACACTTTC CAGAGTAATA TTAGTACCAG AAAGGCCAAA ACGTGAGGAT GTTCTACTCA GGTTAAGAAA TGAGTTACTT GATAGAACAG GTAGTTCTTC AAATATTTCT CCCGAGGGAA GCGGAGGTTC CTCTCTGCTT CACTGTGCTT GTGAGAAGGC AGACATTGGG ATGGTAGAGC TTTTGCTGCA ATATGGTGCA AATGTAAACG CCTCAGATTC AAGTGGTCAA ACGCCGCTGC ACTGTTGTCT TCTAAGAGGC AAAGCGACAA TAGCAAGATT GCTACTCACT AGGGGAGCAG ACCCGGAAGC TATGAACGGA GAAGGCAAAA CCGCTCTTGA TATCGCTGCA GAGTCGAAAT TTACTGATCC AGAAGTCCTC GCTCTCCTTT CAGACCCAAA CGGATACAAT AACAGACAGT GCTGAAAAAG CGGACATAAA AATTTCGGAG CTATGTTTCA TCGTTGCTTT CACGGTTTGA AGAGCCAATC AACACTAAAG GACCTCTACT CTAATGGTCT CGAGCAAGCT TAGCCCCCAA TTATGTAATG TATTTGATGT TTTTGTGATG GATGGATATA GGCTGCATAT TGGGAAATTT ATAGTGTATT GTGTTGTGTC GTGTTGTGTG TATGTGGGAC TGTAGCATCC TAAGTTTGTC ATGTCATTTG TAACTTGTAA GCAATTATTT AAGGTTTTGT TCACTTCGT |
| Length | 3039 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 5159667.. 5166401 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G13300.1 |
| Description | ARF GTPase-activating protein |
| TAIR curator summary | Belongs to 15-member small GTPase gene family, ARF-GAP domain proteins (AGD); corresponds to AGD3, and is one of four proteins belonging to class 1, together with AGD1, AGD2 and AGD4. The protein contains four domains: BAR domain, PH domain, an ARF-GAP domain, and two Ankyrin repeats. In sfc mutants, the secondary and tertiary veins of cotyledons, leaves, sepals and petals are largely replaced by small segments of discontinuous veins. sfc mutants have exaggerated responses to auxin. |
| Alias | [AGD3][SFC][VAN3][ARF-GAP DOMAIN3][SCARFACE][ASCULAR NETWORK DEFECTIVE 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1 |
Ahg475499 | ARM repeat superfamily protein |
| 2.23607 |
Ahg945493 | pumilio 6 |
| 3.16228 |
Ahg491583 | exocyst subunit exo70 family protein G1 |
| 3.4641 |
Ahg483241 | Nucleoporin interacting component (Nup93/Nic96-like) family protein |
| 6.32456 |
Ahg479309 | modifier of snc1,4 |
| 8.42615 |
Ahg481405 | cellulose synthase 10 |
| 9.48683 |
Ahg480549 | multimeric translocon complex in the outer envelope membrane 132 |
| 10.583 |
Ahg494461 | Cyclin family protein |
| 10.9087 |
Ahg491014 | Serine carboxypeptidase S28 family protein |
| 11.3137 |
Ahg485239 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
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| Growth Chamber expression |
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