Detail


ID : Ahg939070

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|939070|scaffold_503261.1
Sequence
TTTATACATC TGATCAAGAT ATGAGTCGTA GGGTGCGGCA GAGAGTGGAG GAAAAAGGAA AGAATAAGGT TGATTCTCCA AGTTATCCTG TGATTGGAGA TGAGGATTTA GCACATAAGG TTCAAGAGTA TCCGGATTGG ACTAGTTTGC CTTATGACAC TGTGCTTTAT CTGTTTACTC GATTGAATTA TCGTGATAGA GCTAGCTTAG CCTCTACCTG TAAGACATGG AGAAGCCTTG GTGCTTCTTC TTGTTTGTGG AGTTCATTGG ATCTTCGAGC CCACAAGTTT GATCTTTCAG TGGCGGCTTC TCTTGCAACT AGGTGTGCTG ATCTTCAGAA GATTAGGTTT CGTGGTGTTG ACTCTGCTGA TGCCATAATT CATCTCAAAG CAAGGACTCT GCTTGAAATT AGCGGCGACT ACTGTAGGAA GATTACAGAT GCTACATTGT CTATGATTGC GGCACGCCAT GAAGCTCTTG AGAGCCTCCA ACTTGGACCA GACTTCTGTG AGAAGATCAC TAGTGATGCT ATAAGAGTTA TAGCCTTTTG CTGTCCAAAA CTGAAAAAGC TACGGGTTTC TGGCATGAGA GATGTTACTT CTGAGGCAAT TGAATCTTTG GCCAAACATT GCCCACAGCT CAGTGATCTT GGATTCTTAG ATTGCCTGAA CATCAACGAA GAAGCATTGG GAAAAGTGGT ATCTCTTCGC TACCTCTCTG TTGCTGGGAC ATCAAACATA AAGTGGAAAG TTGCATTAGA TAATTGGGAG AAGCTTCCGA AGTTAATCGG TTTGGATGTC TCAAGAACCA CCATTGACCA TATTGCAGTT TCCAGGTTGT TGAAATCATC GAAGAGCTTG AAAGTTTTGT GTGCTTTAAA CTGCCCTTAT CTCGAAGAGG ATAAAAGTTA CAGCTCCAAT AGATTCAAAG GAAAGGTCTT ACTTGCTATG TTTACTGATA CTTTTGATGA GCTAGCTTCT ATATTTGCCG ATAACTCAAA GAAACCAAAG GATATGTTTT CTTACTGGAG AGATTTGATA AGAAAGGATA AAAGCACTGA CGAAATAATG CTTTGGATTG AGTGGATCAT TTCTCATACG CTTCTACGAA TTGCAGAGAG CAGCAATTCA CCAGGATTAA ACGATTTCTG GCTGAATCAG GGGGCTACGT TGCTTCTCAG TTTAATGCAA AGCGCACAAG AGGATGTCCA AGAGAGAGCA GCCACAGGAC TTGCGACTTT CATTGTTGTT GATGATGAGA ATGCTAGTAT AGACTGTGGA AGAGCCGAAG CTGTTATGCG AGATGGAGGG ATCCGTCTTC TTCTAGAACT TGCTAAATCT TGGCGAGAAG GTCTTCAATC AGAAGCTGCA AAGGCTATTG CAAACTTGTC GGTAAATGCT AAAGTTGCAA AGGCTGTTGC TGAAGAAGGA GGGATCAGTG TTCTTGCTGA TTTGGCAAAG TCTATGAATA GACTTGTGGC TGAAGAAGCT GCTGGTGGGC TATGGAATCT CTCTGTTGGA GAAGAGCATA AGAACGCGAT TGCTCAAGCT GGAGGAGTGA ATGCGTTAGT TGATCTTATC TTTAGATGGC CAAATGGTTG TGATGGAGTT CTGGAACGTG CTGCTGGGGC ATTAGCAAAT TTAGCAGCAG ACGATAAATG CAGCACGGAA GTTGCAAGAG CAGGAGGTGT GCATGCCTTG GTGATGCTAG CTCGGAATTG CAAGTATGAA GGAGCACAAG AACAGGCGGC TCGTGCTTTG GCTAATCTAG CTGCTCATGG TGATAGCAAT GATAATAATG CTGCTGTTGG ACAAGAGGCT GGTGCATTGG AAGCTCTTGT TCAGCTTACG CAATCGCCTC ATGAAGGTGT TAAACAGGAA GCTGCTGGGG CTCTTTGGAA TTTAGCATTT GATGACAAGA ATCGAGAATC CATTGCTGCA TTTGGTGGTG TTGAAGCCTT GGTGGCACTT GCGAAGTCCT CTTCAAATGC ATCCACAGGT CTACAAGAGA GAGCAGCTGG TGCTCTCTGG GGACTATCTG TCTCAGAAGC AAACAGCATT GCAATTGGCC ATGAAGGTGG TATCCCGCCT CTAATTGCTC TTGCACGATC CGAAGCTGAG GATGTACATG AAACTGCTGC AGGAGCTCTG TGGAATCTTT CTTTTAATCC TGGTAATGCT CTGCGGATTG TGGAGGAAGG GGGAGTTGTA GCACTTGTTC ACCTCTGTTC GTCTTCTGTT TCCAAAATGG CTCGTTTTAT GGCCGCATTA GCATTGGCAT ACATGTTTGA TGGAAGGATG GATGAATACG CAATGATAGG GACTTCATTG GAAAGTACAT CTAAAAGTGT TACCTTAAAT GGTGCTAGAA CATTGGCTCT TGAACACATC AAAGCCTTTA TATCAACTTT CATGGAACAC CAAATCTTTT CAGCTGGTGC TTTATCATCT GCTCCATCTA TGTTATCACA AGTCTCAGAG AAAGCTCGAA TCCCAGAAGC TGGCCACTTG AGATGCAGTG GTTCCGAAAT TGGAAGATTT GTTACAATGT TGCGAAATCC TTGTCTTACA CTCAGATCTT GTGCAGCTTT TGCGCTTCTT CAGTTTACAA TACCTGGAGG TCGTCACGCG ATGCATCACG CTAGCTTGAT GCAGAACGCT GGAGAAGCAA GAGTCTTGCG TTCTGCAGCT GCAGCTGCGA AGATGCCTCG TGAAGCCAAG ATCTTTGTGA AAATTGTGCT TCGCAATCTC GAGCATCACC AGGCAGAATC TTCTAAAGGA AAGAAAGTAT CTTAGAATAG GATTTGATCC TTTTTCTTAG CAAATCAT
Length2828
Protein Sequence
Protein Residue
Map Locationscaffold_5: 18727506.. 18731367
Download Sequence
A.thaliana
AGI-codeAT3G60350.1
DescriptionARABIDILLO-2
TAIR curator summaryARABIDILLO-2 and its homolog, ARABIDILLO -1, are unique among Arabidopsis Arm-repeat proteins in having an F-box motif and fall into a phylogenetically distinct subgroup from other plant Arm-repeat proteins Similar to arm repeat protein in rice and armadillo/beta-catenin repeat family protein / F-box family protein in Dictyostelium. ARABIDILLO-2 promote lateral root development. Mutant plants form fewer lateral roots, while ARABIDILLO-2-overexpressing lines produce more lateral roots than wild-type seedlings.
Alias[ARABIDILLO-2][ARABIDILLO2][ARABIDILLO-2][F-box Armadillo protein 2]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg494798 Galactose oxidase/kelch repeat superfamily protein
3.87298 Ahg478832 sequence-specific DNA binding transcription factors
6.63325 Ahg476142 Sterile alpha motif (SAM) domain-containing protein
16.6132 Ahg486704 AP2/B3-like transcriptional factor family protein
20.4939 Ahg477535 RING/FYVE/PHD zinc finger superfamily protein
22.8035 Ahg941983
22.9129 Ahg949543 quinolinate synthase
24.2487 Ahg932754 Leucine-rich receptor-like protein kinase family protein
38.6782 Ahg497011 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
40 Ahg495713
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression