Detail



ID : Ahg478836

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478836|fgenesh2_kg.3__1537__AT3G14210.1
Sequence
TGAAGTTCAC CACCCGACCA GTCTTACTCT CTCTTAACAA ATATTATTGA GATGGCAGAC AATTTTAATT TGGTGAGTGT TCTGGGAGTC TTATTGGTAT TAACCATCTT CCATAATCCG ATCATGGTCT ACGCCGGCGA GGGTGTTCCC AACGTAGCGT TGTTCACTTT CGGAGACTCT TACTACGACG CCGGAAACAA AGTGTTTCTC AGCCAAAGAA AAGATCTTCC ACAAATCTAT TGGCCTTACG GAAAATCCCG CGACTACCCT AATGGCAAGT TTTCCGACGG CCACATCGTT CCCGATTTTA TCGCTGATTT CATCTCTATT CCGAATGGAG TACTCCCACC GGCACTTAAA CCGGGTGTTG ATATTTCACG TGGAGTCAGC TTAGCCGTCG CCGATGCTTC TATTCTCGGA GCTCCAGCTG AATCTATGAC ACTAAATCAA CAAGTGGTTA AATTCAAAAC TATGAAATCT AATTGGAACG ACAGCTACAT CGGGAAATCA CTGTTTATGA TATACATTGG TACGGAAGAT TATTTGAATT TCACCAAGGC CAACCCCACG GCAGACGCTT CTGCTCAACA AGCTTTTGTC ACTTCCGTTA CTAACCAATT AAAGAACGAC ATCGGTTTGT TGCACTCTTG GGGAGCGAGG AAATTCGTGG TTCAATTGCT AGCACCATTG GGATGCTTAC CGATCGTGAG ACAAGAATAC AAAACCGGCA ACGACTGTTA TGAGCCGCTC AATGATTTGG CCAAACAACA CAACGAAAAA ATCGGCCCAA TGTTAAACGC ATTTGCTAAA TCTAGTACTA GCCCCAATGG TTTTCAGTTC ACCGTCTTCG ATTTCTACAA CGCCGTTCTT CGTAGGATTA CGACAGGAAG AAGTCTTAAC TACAGATTGT ACATAACGAA TTCGTCCTGT TGCGGTGTTG GGACGCACAA TGCATATGGT TGCGGAATGG GAAACGTGCA CTCGAAGCTA TGTGAGTACC AAAGATCTTA CTTCTTCTTC GATGGACGTC ACAACTCAGA GAAGGTTCAG GAGCAATTTG CTCATCTTCT ATATGGAGCC GACCCTAGCG TTGTCCAGCC AATGACGGTC CGTGAGCTAA TCGTCTACCC AACCGGAGAG ACTATGCGTG AGTATTGGGA ACCTAACAAG TCTTCTATTC GTCGTCGTCC ATCTGGTGAC CCCTACCTCG GGTTCTCGGC CTTTTAATGA 
Length1230
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5595946.. 5597685
Download Sequence
A.thaliana
AGI-codeAT3G14210.1
Descriptionepithiospecifier modifier 1
TAIR curator summaryA semidominant QTL which has an epistatic effect on the Epithiospecifier gene. Represses nitrile formation and favors isothiocyanate production during glucosinolate hydrolysis. The functional allele deters the insect herbivory T. ni.
Alias[ESM1][epithiospecifier modifier 1]
Gene coexpression
MR
MR Locus Description
1 Ahg929199
5.09902 Ahg472662 MLP-like protein 423
5.09902 Ahg328029 cytochrome P450, family 81, subfamily F, polypeptide 3
8.48528 Ahg486566 FASCICLIN-like arabinogalactan-protein 10
9 Ahg480193 O-Glycosyl hydrolases family 17 protein
9.8995 Ahg925746 Beta-galactosidase related protein
10.4881 Ahg932181 Lipase/lipooxygenase, PLAT/LH2 family protein
13.5647 Ahg932640 cytochrome P450, family 82, subfamily F, polypeptide 1
16.0935 Ahg477690 Li-tolerant lipase 1
16.1555 Ahg927503 Leucine-rich repeat (LRR) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression