| Annotation |
|---|
| Description | jgi|Araly1|923384|scaffold_104665.1 |
| Sequence |
GTCTTCTCGC CGGAGAAGAC ATGCTCCGGT CAATAACTTG TTCCTCATCC CTTGCTTCGA CCTCTCTCTT CTTCCGCTTC TTTCGCCAGT CCCCTCGCTC TTACTTTTCG CCGTCATCGT CTTCGACCGC CGTCGGCCGC AACATTCGCC GGCTTTCTAC TCCAGAAGCT GCTGGAAGTC GTTTCTTTCT ACCCCGTGAC TTTAAACTGC GCTCCGGTGC GAGTCGTGGT CTCAATGGAC AGTTCTCTCG CTTATCCATT CGCGCCGTCG CTACACAATC CGCACCTTCT TCAATTCCCG GTCAAGATGA AGCTGAGAAG CTTGGATTTG AGAAAGTCTC TGAAGAGTTT ATCTCAGAGT GTAAATCTAA GGCTGTTCTC TTCAGACACA AGAAAACCGG TTGCGAGGTG ATGTCTGTTT CAAACGATGA TGAGAACAAG GTGTTTGGCA TTGTTTTCAG GACTCCTCCG AAAGATTCCA CTGGCATTCC TCACATACTG GAACATAGCG TATTATGTGG GTCAAGAAAG TACCCGCTGA AGGAACCATT TGTCGAATTA TTAAAGGGAA GTTTGCATAC TTTCCTTAAT GCATTCACAT ATCCTGATAG GACTTGCTAC CCAGTTGCTT CCACAAATAC AAAGGATTTC TACAACCTTG TCGATGTATA CTTGGATGCT GTGTTCTTCC CCAAGTGTGT GGATGACGTT CACACTTTTC AGCAGGAGGG TTGGCACTAT GAGCTTAACG ATCCTTCAGA AGACATATCT TACAAAGGCG TTGTTTTTAA TGAGATGAAA GGTGTCTATT CACAACCTGA TAATATACTA GGGCGGATTA CTCAACAGGC CTTATGCCCG GAAAATACAT ACGGTGTTGA CAGTGGAGGT GATCCAAAAG ATATCCCTAA TCTTACGTTT GAGGAATTTA AGGAGTTCCA CCGTCAATAT TATCACCCAA ACAATGCCAG GATATGGTTC TATGGAGATG ATGATCCAGT TCACCGCCTC TGCGTCTTGA GTGAATACTT GAACATGTTT GATGCAAGTC CAGCTCGTGA TAGTTCAAAG GTTGAACCAC AAAAGCTATT CTCTGGGCCT CGCAGAATTG TTGAAAAATA TCCTGCTGGT GAAGATGGCG ACCTTAAGAA GAAACGTATG GTGTGCCTTA ACTGGCTGCT CTCTGACAAG CCACTGGACT TGCAAACTCA ACTCGCGCTT GGGTTTTTGG ATCATCTTAT GCTTGGGACT CCTGCTTCCC CATTGAGAAA AATCTTATTG GAAAGCGGAT TAGGAGAAGC TCTTGTTAAT AGTGGGATGG AAGATGAACT TCTCCAGCCC CAATTCAGTA TAGGTTTGAA AGGTGTTTCC GATGATAATG TCCAAAAGGT TGAAGACTTG GTCATGAATA CTCTGAGAAA CTTGGCAGAT GAGGGGTTTG ACACTGATGC TGTTGAGGCA TCTATGAATA CCATTGAGTT TTCTCTGAGA GAAAACAATA CAGGGTCTTT CCCTCGTGGT TTATCACTTA TGCTTCAATC AATTGCGAAA TGGATATACG ACATGGATCC TTTTGAGCCA TTAAAGTATG AGGAATCATT GAAGTCCCTG AAAGCTAGAA TAGCTGAGAA AGGATCTAAG GCTGTCTTTT CCCCTCTGAT AGAGGAGTTT ATTTTGAACA ACCCTCATTG TGTTACTATC GAGATGCAGC CTGATCCAGA GAAAGCTTCT CAAGAGGAAG CGGAGGAGAA AATTATTCTA GAAAAAGTTA AAGCAAGTAT GACAGAAGAG GATCTTGCAG AACTAGCGCG TGCCACAGAG GAGTTGAAAT TGAAGCAAGA GACTCCTGAC CCTCCTGAAG CACTGAAATG CGTTCCAAGT TTAAACTTGA GTGACATTCC AAAAGAACCT ATATATGTTC CCACTGAGGT TGGAGATATT AATGGCGTGA AGGTTTTGCG GCATGATCTC TTTACAAATG ATATACTCTA CACTGAAGTA GTCTTTGATA TGGGCTCACT AAAACATGAG CTTCTTCAAC TGATACCTCT CTTCTGTCAA TCATTACTAG AGATGGGCAC GCAAGATTTG ACTTTTGTAC AACTTAATCA GTTAATTGGA AGAAAGACCG GAGGGATATC AGTTTATCCC CTTACATCCT CTGTGTATGG TAGGGATGAT CCATGTAGCA AAATTATTGT GCGTGGAAAA TCCATGGTTG GACGCGCTGA AGACCTTTTC AACCTGATGA ACTGTGTGCT GCAAGAGGTT CGATTTACAG ATAAACAACG GTTTAAACAA TTCGTCTCTC AGAGTAGAGC ACGAATGGAG AACCGATTGA GGGGAAGTGG TCAAGGAATT GCTGCTGCGA GGATGGATGC AATGTTGAAC GTTGCTGGAT GGATGTCTGA ACAGATGGGT GGTCTCAGTT ACCTTGAATT TCTACACACC CTTGAACAGA AGGTGGATCA AGACTGGGAA GGAATTTCAT CCTCACTTGA GGAAATCAGA AGATCTTTCC TTTCCAGGAA TGGTTGCATA GTTAATATGA CTGCTGATGG GAAGTCCCTC ACAAACACGG AAAAATATGT TGGAAAATTT CTTGATTTAC TCCCTGAAAA TCCATCTGGT GGACTCGTCA CTTGGGATGC ACGACTTCCT TTGAGAAATG AAGCAATTGT GATACCAACC CAGGTGAACT ATGTTGGAAA AGCGGGAAAT ATATACAGCA GTGGCTACGA GCTTGATGGA AGTTCATATG TTATATCAAA GCATATTAGT AACACATGGT TATGGGATCG TGTCCGTGTA AGTGGTGGTG CATATGGAGG TTTCTGTGAT TTTGATTCAC ATTCGGGAGT ATTTTCGTTC TTATCTTACC GTGATCCCAA CCTATTAAAG ACTCTGGACA TATATGATGG AACTGGGGAT TTCTTACGTG GCCTCGATGT CGATGAAGAC ACCCTTACTA AAGCAATTAT TGGGACAATT GGCGATGTTG ATTCATACCA ACTCCCTGAT GCCAAAGGTT ATAGCAGTTT GTTGAGGCAT TTACTTAATG TAACCGATGA AGAGAGGCAA ATAAGACGTG AAGAGATACT ATCAACAAGT TTGAAGGACT TCAAGGAATT CGCAGAGGCA ATAGACTCAG TTAGAGATAA AGGCGTTGCA GTGGCAGTGG CATCACAAGA AGACATTGAT GCAGCAAACA AAGAACGCTC AAACTTTTTC GAGGTGAAGA AAGGTCTCTG AGTCTGAGAC CCTCTTATAA AG |
| Length | 3272 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 24600743.. 24607935 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G49630.1 |
| Description | presequence protease 2 |
| TAIR curator summary | Zinc metalloprotease pitrilysin subfamily A. Signal peptide degrading enzyme targeted to mitochondria and chloroplasts. Expressed in flower, leaf and root. Not expressed in silique and shoot. |
| Alias | [ATPREP2][PREP2][presequence protease 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.87298 |
Ahg341756 | tRNAse Z4 |
| 9.38083 |
Ahg490741 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 12.9615 |
Ahg471206 | alpha/beta-Hydrolases superfamily protein |
| 14.1421 |
Ahg482933 | pseudouridine synthase family protein |
| 14.2829 |
Ahg331330 | methyltransferase 1 |
| 15.5885 |
Ahg900847 | ATP-dependent caseinolytic (Clp) protease/crotonase family protein |
| 16.2173 |
Ahg478856 | Pyridoxal-dependent decarboxylase family protein |
| 19.4422 |
Ahg943901 | phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative |
| 22.4499 |
Ahg472553 | ARM repeat superfamily protein |
| 25.4558 |
Ahg494345 | Minichromosome maintenance (MCM2/3/5) family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|