Detail



ID : Ahg479152

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479152|fgenesh2_kg.3__1853__AT3G16857.2
Sequence
AGAGAGCTTT ACTCTGTGAA TAAAAAAACA GAGAAAAAGA GCTCTAAGGT GAGACAAGCC ATGTCTTCTT CAACTCCCTA AGTCTCATCT CACCATCTCT CTCTTCTCTT TTTTTTTTGG TTACCCAGAA ATTCACTTCT ATCTCCAAAT TCAATTTTAA ATCGAATAAA AATCGCGTCC ATTTCGCCTC TTTATTTCTG GGTATATATT CTTTTGCTTT TCTTTTTTTT TTGGTTCTTG GGTTCGAGCA AGAGAGATAT GATGAATCCG AGTCACGGAA GAGGACTCGG ATCGGCTGGT GGGTCTAGCT CCGGTAGAAA TCAAGGCGGT GGTGAGATCG TAGTCGAGAT GTTTCCTTCT GGTCTTCGAG TTCTTGTCGT TGACGATGAC CCAACTTGTC TCATGATCTT AGAGAGGATG CTTAGGACTT GTCTTTACGA AGTAACGAAA TGCAACAGAG CAGAGATGGC ATTGTCTCTG CTCCGGAAGA ACAAACATGG ATTTGATATT GTAATCAGTG ATGTTCATAT GCCTGACATG GACGGCTTCA AGCTCCTTGA ACATGTTGGT CTAGAGATGG ACTTACCTGT TATCATGATG TCTGCGGATG ATTCGAAGAG TGTTGTTCTA AAGGGAGTGA CGCACGGTGC GGTTGATTAC CTTATCAAGC CGGTACGTAT GGAGGCACTT AAGAACATAT GGCAGCATGT GGTTCGGAAG AGGAGGAGTG AGTGGAGCGT ACCGGAACAT TCTGGGAGCA TTGAGGAGAC CGGCGAGAGA CAGCAGCAGC AACATAGAGG AGGTGGTGGT GGTGCAGCTG TTTCTGGTGG CGAGGATGCG GTGGATGATA ACTCTTCCTC GGTTAACGAA GGGAACAACT GGAGGAGCAG CTCACGGAAG CGGAAAGACG AGGAAGGAGA AGAGCAAGGG GATGATAAGG ACGAAGATGC GTCGAATTTG AAGAAACCGC GTGTTGTTTG GTCTGTTGAA TTGCATCAGC AGTTTGTTGC TGCTGTTAAT CAGCTTGGCG CAGAGGCGGT TCCTAAGAAG ATCTTAGAGC TGATGAATGT TCCTGGGCTA ACCCGAGAAA ACGTAGCCAG TCACCTCCAG AAATACCGGA TATATCTAAG ACGGCTTGGG GGAGTATCTC AGCACCAAGG CAATCTAAAC AACTCGTTTA TGACGGGTCA AGATGCAAGC TTCGGACCTC TTTCGACGTT GAATGGGTTT GATCTTCAAG CGCTAGCCGT CACAGGTCAG CTACCTGCTC AGAGCCTTGC ACAGCTTCAA GCTGCTGGTT TAGGCCGGCC TGCGATGGTC TCTAAGTCAG GTTTGCCGGT TTCCTCCATT GTGGACGAGA GAAGCATCTT CAGCTTTGAC AACACGAAAA CAAGATTCGG AGAGGGGCTT GGTCATCACG GGCAACAACC CCAACAGCAA CCGCAGATGA ACTTACTTCA CGGTGTCCCG ACAGGTTTAC AACAACAGCT TCCTATGGGT AATCGAATGA GTATTCAACA ACAGATCGCC GCTGTTCGAG CCGGACATAG TGTTCAAAAC AACGGAATGC TGATGCCTCT AGCGGGTCAG CAATCTTTGC CTCGGGGACC ACCGCCAATG CTAACCTCGT CGCAATCATC CATCAGGCAG CCGATGTTAT CAAACCGTAT TTCCGAGAGA AGCGGTTTCT CTGGAAGGAA CAATATTCCC GAGAGCAGCC GAGTGTTACC GACAGGTTAC ACCAACCTCA CAACACAACA CTCATCAAGC GCGATGGCCT ATAACAACTA CCAACCAGAA CTCCCTGTGA ACAGTTTCCC GCTAGCAAGT GCACCAGGCT TATCAGTTCC GGTAAGGAAA GCCACTTCTT ACCAGGAAGA GGTTAACAGT TCCGAAGCGG GTTTCACCAC CCCGAGCTAC GACATGTTCA CCACCAGACA GAACGATTGG GATCTGCGGA ATATTGGAAT AGCCTTTGAC TCACATCAGG ACGCAGAATC CGCTGTGTTT TCCGCTTCAG AAGCTTACTC TTCTTCATCA ATGTCAAGAA ACAACACGAC AGTTGCAGCC ACAGAGCATG GCCGGAACCA CCAGCAGCCA CCTCCAGGAA TGGTCCCGCA CCATCAGGGT TATGCAGATG GAAACAGTGG TTCAGTGAGG GTGAAATCAG AGAGAGTGGC TGCAGATACA GCAGCAATGG CGTTTCACGA GCAGTATAGT AATCAAGAAG ATCTTATGAG CGCACTTCTT AAGCAGGAAG GGATTGCACC GGTTGATGGA GAATTCGACT TTGACGCATA CTCGATCGAT AATATTCCGG TTTGATTGGA TAAAAAACCG ATAAACTGGA GGGACTATCG GGATTTGTAT TGTATCATTT TACACGACGA TCTACTTAAA TTTGTTTTGA TATATGTATA GTCTGCATGA AATTTTAAAT GGCAGATTAT ATGTTAGGGG TTAGTTTCCT TGGAGATTCT TTTGTTCCTC ATCTATGTAG TGAGGCTGTT TAGGGGTTT 
Length2519
Protein Sequence
Protein Residue
Map Locationscaffold_3: 6788438.. 6792114
Download Sequence
A.thaliana
AGI-codeAT3G16857.2
Descriptionresponse regulator 1
TAIR curator summaryEncodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.
Alias[ARR1][RR1][response regulator 1]
Gene coexpression
MR
MR Locus Description
2 Ahg489126 Adaptor protein complex AP-2, alpha subunit
3 Ahg487227 RING/U-box superfamily protein
3.4641 Ahg492421 MAC/Perforin domain-containing protein
4.24264 Ahg948606 chromatin remodeling 4
4.47214 Ahg486820 TIC-like
6.63325 Ahg495812 DNA ligase IV
6.9282 Ahg928168 embryo defective 2016
7.87401 Ahg473664
8.42615 Ahg927086 F-box family protein
11.0905 Ahg944199 BES1/BZR1 homolog 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression