| Annotation |
|---|
| Description | jgi|Araly1|928168|scaffold_300625.1 |
| Sequence |
ACATTTCTTG AGCGTGGGTG ATGTCTATGG TTGGTTATCT AAATGTTGAC AATATTTTCG TTAGGGCAAC TTCACCTCCT TCATTTGCAT TGGAAGTGTT CGTTCGATGT GAAGGAGAAT CAAAATTTAA GCGACTTTGT AATCCTTTTC TTTACACTCC TTCAGCGCCC TACCCATTGG AAGTGGAGGC TGTTGTAACA AACCATCTGG TGGTTAGAGG CAGCTATCGA AGTTTGAGCT TGATCGTCTA TGGGAACATC GTGAAAGATT TGGGGCAGTA CAATATCATT CTTGAAGGTC GTTCTGTAAC TGATATTGTG AGTACCACTG AGGGTAATCT TGAGGACTTG CCATTGGTAC TGCACTCAGT TAACAGAACA ATAGAGGAAT GTCTATCCTC TCTAGACATA GTATCTCTCC CCCTCGCTAC TGTAGATGTG CCTGTGGAAG TAAAGCGATT GTTGCAGCTG CTGCTAAAAG TCTTTGATAA GCTAGCTACT AGTGATGTAG TAAATAAATT TGTGGATACG GTAGTGTCTG GGGTCTCGTC TTATGTCACA GACAATGTAG ATTTCTTTTT AAAGAATAAG AATTGTCCGG CCGTGGCCAG TTCCGTAGAT TCTGGGTTAT TTCATGATAT AATTGACAAG GTTAAGAAAG AAATTCTTGA TCTCAATGAA ATTCAAGAAT CAGATGTGGC ACTAGGAGTG TTCAGTTTTC TTGAATCAGA GACTTGTTTG GCTACTTCAC AACAATTGGT TGATATGTTG AGCCCATATA TTCAGTTTGA AAGAGATTCC TTATGTACTG TCCTTCCACA GCTTTCAAAG GGAAAAGCCA CTCTTTTGGG TTTAAGTTTG GCCTTCTTAT TATGCTCTGG CCGAGAAGGC TGCCTCCAAT TTGTCAATTC CGGTGGGATG GATCAACTTG TATATTTGTT TGGTCATGAT GTTCAGAATT CTACCACCAT TACATTGTTG TTGCTTGGAG TTGTTGAGCA GGCTACACGC CATTCAGTTG GGTGTGAAGG ATTTTTAGGT TGGTGGCCTC GTGAGGATGG AAGTATCCCA TCTGGGAAGA GTGAGGGCTA CTGTCTTCTG TTGAAATTAC TTATGCAGAA ACCATGCCAT GAGATTGCCT CTCTTGCAAT TTATATTCTT CGTCGTTTGA GAATTTACGA GGTTATATCA AGATATGAGT TTGCAGTGTT GTCAGCATTG GAAGGTCTCT CCAATTCTCA TGCGGCTGCA ACTCATAATC TGGATATGCT ATCTGATGCT AAGTCACAAC TTCAAAAGCT CCAGAACCTG ATGAAGTCAC TTGGATCAGT TGAAGATCCC TCACCATCAG CCTACGCAGA AAGAAGTTTG GTTTCTGATC ATTCGGAAGG CTGGTTGTCA TACAAAGCCA CGAGTAAACT AACTGCTTCA TGGGCATGTC CGTTTTATAG CTCTGGAATT GATTCGCACA TGTTGGCACT TCTGACGGAG CGGGGTTTTC TTCCTTTGTC AGCAGCACTT CTCTCAATGC CTGGATTGCA TTCTAAAGTT GGAGACATTA TGGATGTCTT TACTGATATC GCAATGTTTA TTGGCAACAT AATTCTTTCA TTGATGTTTT CACGCACAGG ATTGAGCTTT TTGCTACATC ATCCTGAACT GACTGCTACA ATAATACAAT CTCTGAAGGG ATCCGTCGAT CTGAACAAGG AGGAGTGTGT CCCCCTCCAC TATGCTTCAA TTTTAATATC CAAGGGTTTT ACTTGCAGCT TACTGGAAAT TGGAATAAAT CTTGAGATGC ATTTGAGGGT GGTGAGTGCG GTAGATCGTT TGCTCAAGTC GACACAACAA ACAGAAGAAT TTCTATGGAT TTTATGGGAG TTGCGTGATG TTTCTAGGTC TGATTGTGGG CGTGAAGCTT TATTGACGTT AGGTGTTTTT CCAGAGGCTT TAGTAGTCTT GATTGAAGCT TTGCATTCAG CCAAGGATAT GGAGCCAGCA GTTGAAAATA GTGGAATTTC ACCGCTTAAT CTAGCAATAT GTCACTCAGC TGCTGAGATT TTTGAGGTCA TAGTCTCTGA CTCAACTGCA TCATGCTTGC ATGCTTGGAT TGAACATGCC CCAGTCCTTC ATAAGGCCTT GCATACTTTG TCACCGGGTG GTTCTAATCG AAAAGATGCT CCTTCACGAT TACTTAAATG GATTGATGCG GGTGTGGTTT ATCACAAGCA TGGTGTAGTT GGCCTTTTAC GTTATGCTGC TGTCTTGGCT TCTGGAGGGG ACGCCCAATT ATCATCATCA AGCATCCTTG CACTGGATTT AACACAGGCT GAGAATGGTG CCGGAGAATC AACAAATGTC TCTGAGATGA ACGTCCTCGA TAATCTTGGA AAAGTTATCT TTGAGAAATC TTTCGAAGGT GTTAACCTTT CTGATTCATC AATTTCACAG TTGACAACAG CACTTCGAAT TTTAGCGCTG ATTTCAGATA ATTCAGTATA TGCTGTAGTC TTCTTATTTA AGTGTTCTGA AATGCTGTGC TTTGTACAGA CTGTTGCTGC TGCTTTATAT GACGAGGGTG CGGTTACAGT TGTGTATGCT ATCTTGGGAA CTAAGGAGCA GTATAGAAAC ACCAAACTGA TGAAGGCACT CCTAAGGCTA CATCGGGAAG TCAGCCCGAA GCTAGCTGCT TGTGCAGCTG ACTTGTCCTC CCATTATCCG GACTCTGCTC TTGGCTTTGG AGCAGTGTGC CACCTCATTG TGTCCGCCCT TGTCTGCTGG CCAGTTTATG GATGGATTCC TGGACTATTC CACACTCTTC TTTCGGGTGT CCAGACGTCC TCTGTTCCTG CCTTGGGTCC AAAGGAGACC TGTAGTTTCC TCTGCATTCT AACCGATATT CTCCCTGAAG AAGGAGTCTG GTTTTGGAAG AGTGGCATGC CCTTATTAAG TGGTCTCAGA AAGTTGGCGG TTGGGACATT GATGGGTCCA CAGAAGGAGA AACAGATCAA CTGGTATCTG GAGGCTGGTC CTCTTGAAAA GCTGATAAAC CATTTGACAC CTAATCTTGA AAAGATTGCA AAGATTATCC AACATCATGC AGTATCTGCA TTGGTGGTCA TTCAGGATAT GCTTCGGGTT TTCATAGTTC GTATTGCATG TCAAAGGGTT GAGCATGCTT CTATCCTTCT GAGGCCCATA TTTTCATCTA TCAGAGATGG TATTTTGGAT CAGTCATCAA CAAGAGACAC TGAAGCTTAT ATGGTCTACA GATATCTTAA TTTTCTGGCT AGTTTATTAG AGCACCCGCA TGCTAAGGGA TTACTCTTAG AGGAGGGTAT TGTTCAACTG CTTGTGGAAG TTCTGGAAAG ATGTTATGAT GCCACTTATC CAAGTGAAAA CAGGGTTCTA GAGTATGGAA TTGTGTCCGA GTCTAGTGTG ATTCAGTGGT GTATTCCAGC TTTCAGATCG ATCTCACTGC TATGTGATTC ACAAGTGCCT CTCTTGTGCT TTCAGAAGAA AGAGCTATTG GCCAGTTTGA GTGCAAAAGA TTGTGCATTG ATTTTACCCT TTGTGCTGAA GTTCTGCCAG GTCTTGCCTG TTGGCAATGA GCTATTATCT TGTCTCGGCG CTTTCAAAGA CCTGATCTCA TGTGGTGAAG GTCAAGATGG TCTGGTTTCA CTTTTGTTTC AATTGCTTTC TGGTGCCGAA GAACCTGTAT CTGAAAGGTG GTGTGACACT CATAATTTGA GTCTCGATCA ACTAGAAATG AAGAAAAATC CCCCTTTTCT GTCTTGCTGG ATCAAGTTAT TGAACTCAAT TAATTCAAAA GGTGGTTTGT CTAGTCTTGC AATTAAGGCA GTAAACGTTC TGAGCGTGGG CTCCATCAGA TTATGCCTTG ATGGTAAAAG TTTGAACTCG AGGAAGGTTG CAGGACTAAA ATCCCTCTTT GGCCTTCCAA GTGAGTTTAG TGGTACAGAC ACTTTTAGAG AGGAAAATAT TGGTTTTATT GAACAAATGG TGACATTGTT GAGTTCAACG ACTTCTGGAT CTGATAGTTC CGAAACAGCT GAGATGAAGC CCTATTTGCA TGAGGCATCT CGGTCGTTGC TGTCGTTGCT AAAAGATGGG AATATTGATG ATATTATCTC CTGCAAAGGT GTTCTTGTTT CTCCTGGGAA TTTTGATATG GATGATTTTG ACTTTGAAAA CATTGAGGAC GATCTCTATC AAAGAGGACT TGAAGACAAG TTCTGGTGGG AATGTCCAGA AACATTACCT GAGCGTCTGC CCCAGTCATC TCTCCCTGCG AAAAGGAAAC TACCAACTTT GGAGAGCTCT AGCAGGCGTG CTAAAGGCGA AAACTCTTCT GTTGACATAC CGACCCAAAA TTCAGTTCAC CGGGCGCTGG GTTCTTTATC CCTTCCTCCT GCTCCCACAC GTAGAGATAC CTTTAGGCAG CGCAAGCCGA ATACCAGCAG GCCTCCCTCT ATGCATGTAG ATGATTATGT TGCTAGGGAA AGGAGTGTTG ATACAGCTGG TAATTCTAAT GCAATAACCA TTTCACGAGC AGGATCTAGC AGTGGTAGAC CTCCATCTAT TCATGTTGAT GAGTTTATGG CCAGACAGAG AGAACGAGGC CAAAATCCCT CCACCATTGT GGTTGGAGAG GCTGTTGTGC AAGTGAAAAA TCCTACTCCT GCTAGAGATT CTGAAAAAGT TGCAGGTAAA CCTAAACAAT TCAAAGCCGA TCCTGATGAT GATCTACAAG GAATAGATAT AGTGTTTGAT GGTGAGGAGT GTGAAGGACC TGATGACAAG TTGCCCTTTC TTCAGCCAGA TGAGAACCTT ATGCAGCCTG CTCCTGTCAT GGTTGAACAA AACTCTCCTC ACTCCATTGT TGAAGAAACC GAGAGTGATG CAAATGGAAG TAGTCAATTC TCTCACATGG GCACACCAGT GGCATCTAAT ATTGACGAAA ACGTCCAGAG CGAATTTTCA TCAAGGATTT CAGTTTCACG CCCTGATATG TCGTTGATTC GGGAACCAAG CATTTCTTCA GACAGAAAAT TTGTTGAGCA AGCAGACGAA TCAAAGAAAA TGGCCCCTCT AAAGAGTGCC GGCATATCTG AATCCGTGTT TGTACCTGCT TACAACATGC CAGGATCTTC AGGACAAAAT TTGATTGATC CTAGAGTGGG TCCTCAGGGC TTCTATTCAA AGAGTAGTCA GCAACACACG GGCCATATTC ATGGTGGATT CAGTGGTCGG GGGGTATATG AACAGAAAGT GATGCCAAAC CAGCCTCCTT TACCCTTAGT GCCACCTCCA TCAGTCTCAC CTGTGATACC ACATTCCTCT GATTCTCACT CTAATCAATC CTCCCCGTTT ATTAGTCATG GAACACAATC TTCAGGAGGA CCCATCCGGC TTACGCCACC CCTCCCTTCA GCAATGCCCC AGTACTCATC TAACCCATAT GCCTCGTTAC CACCAAGGAC ATCTACAACT CAATCTTTTG GATACAGCCA GGCCGGCGTA GGTACCACTG AACAACAACA GAGTGGGCCA GTCATTGATC ATCAGTCTGG CAATCTATCT GTTTCAGGTA CCGGAATGAC CTCTTACCCT CCCCACACTT TAATGTCAGC CCATAATTTT AGCAGGCCAT CATCTCTCCC TGTGCCATTC TATGCAAATC CTTCGCATCA AGGAGGTGAT AAGCCGCAAA CTATGTTGTC GGTTCCCTCC ATCCCTCAAT CACTCAATCC ACAGTCCATC CCTCAGCTGC AATCGATGCA GCTTTCACAG TTACAACGCC CTATGCAGCC TCCTCAGCAT GTTAGACCAC CCATACAGAT ATCTCAACCA TCAGAGCAAG GAGTATCAAT GCAAAACCCA TTTCAGATTC CAATGCATCA AATGCAGATG ATGCAACAGA CGCAAGTCCA GCCGTACTAT CACACTCCTC AACAGCAAGA TCTCTCTCAG GTGCAGCAAC AGCCACAGCA TCATGCTGTT CAAGGTCAGC AAGGAGCTGG GACTTCTCAG CAACAAGAAT CTGGAATGTC ATTACATGAT TACTTCAAGT CTCCAGAAGC CATTCAGTCT CTATTAAGTG ACCGTGACAA GCTGTGTCAG CTTCTGGAAC AACATCCAAA GTTAATGCAG ATGCTTCAGG AAAAACTTGG GCAGCTATGA GGAGAGAGAG ACTTTTCAGC |
| Length | 6220 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 2074986.. 2085322 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G05680.2 |
| Description | embryo defective 2016 |
| TAIR curator summary | |
| Alias | [EMB2016][embryo defective 2016] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.73205 |
Ahg951196 | Glycosyl hydrolases family 31 protein |
| 5.2915 |
Ahg470078 | SEC7-like guanine nucleotide exchange family protein |
| 6.245 |
Ahg478119 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 6.9282 |
Ahg479152 | response regulator 1 |
| 8.66025 |
Ahg897087 | HOPM interactor 7 |
| 9.53939 |
Ahg937974 | DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding |
| 10.3923 |
Ahg488895 | golgi nucleotide sugar transporter 4 |
| 10.583 |
Ahg943674 | transducin family protein / WD-40 repeat family protein |
| 11 |
Ahg931346 | |
| 11.7473 |
Ahg936446 | uridine kinase-like 2 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|