Detail



ID : Ahg932026

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|932026|scaffold_400014.1
Sequence
TCTTCATCAC AAAGAGAGAG ATGGAGAACG GTGAGAAAGC AGCTGAGACT GTTGTTGTTG GGAACTATGT TGAGATGGAG AAGGATGGTA AAGCTTCAGA CATCAAATCT AAGCTCTCTG ACATGTTTTG GCATGGTGGC TCTGCTTATG ATGCTTGGTT CAGCTGTGCT TCCAATCAGG TGGCACAAGT GCTGTTGACA CTGCCATACT CGTTCTCACA GCTGGGGATG CTCTCAGGGA TTCTGTTTCA GCTCTTCTAT GGCATCTTAG GTAGTTGGAC TGCTTACCTC ATCAGCATTC TTTATGTTGA ATACAGAACT AGAAAGGAGA GAGAGAAAGT TAACTTCAGA AACCATGTCA TTCAGTGGTT TGAGGTTCTT GATGGATTGC TTGGGAAGCA TTGGAGGAAT GTTGGTTTAG CTTTTAACTG CACATTCCTT CTCTTTGGAT CTGTCATTCA ACTCATAGCT TGTGCCAGCA ACATATATTA CATAAATGAT AATCTGGACA AGAGGACATG GACATACATA TTTGGAGCAT GTTGTGCAAC CACAGTCTTC ATTCCTTCCT TCCACAACTA CAGGATCTGG TCTTTTCTTG GACTCTTGAT GACCACTTAC ACTGCTTGGT ACCTCACCAT TGCCTCCATC CTCCATGGAC AGGTACAAGG AGTGAAGCAT TCAGGACCAA GCAAGCTGGT TTTATACTTC ACAGGGGCCA CAAACATTCT TTACACATTC GGTGGACATG CTGTTACTGT AGAGATAATG CATGCTATGT GGAAACCGCA GAAGTTCAAG TCCATATACC TCTTTGCAAC ACTCTACGTG CTGACGCTAA CGCTGCCTTC TGCGTCTGCG GTTTATTGGG CGTTTGGTGA TTTGCTTCTA AACCATTCAA ACGCATTTGC TCTTCTCCCA AAGAATCTTT ACCGTGACTT TGCAGTTGTG CTTATGCTCA TCCATCAGTT CATTACCTTT GGTTTTGCTT GCACGCCACT CTACTTTGTG TTGGAGAAGC TTATAGGGAT GCATGAGTGC CGAAGCATGT GTAAACGAGC TGCCGCGAGG CTTCCTGTTG TTATACCCAT TTGGTTTCTT GCTATCATAT TTCCTTTCTT CGGTCCCATT AACTCAACTG TTGGATCTCT ACTCGTCAGC TTCACTGTCT ACATCATCCC TGCACTAGCT CATATCTTCA CCTTCCGCTC CTCCGCCGCA CGTGAAAATG CCGTGGAGCA GCCCCCGAGG TTTCTAGGAC GGTGGACTGG GGCTTTCACC ATCAACGCCT TCATAGTTGT GTGGGTGTTC ATTGTTGGAT TCGGGTTCGG TGGTTGGGCT AGTATGATCA ATTTTGTTCA CCAAATTGAC ACCTTTGGCC TCTTCACCAA ATGCTACCAA TGCCCTCCAC CGGTTATGGC CTCACCTCCT CCCATCAGCC ATCCTCACTT CAATCACACT CATGGCCTTT GAATTATAAG CAACGAATCT AG 
Length1492
Protein Sequence
Protein Residue
Map Locationscaffold_4: 121614.. 123710
Download Sequence
A.thaliana
AGI-codeAT2G21050.1
Descriptionlike AUXIN RESISTANT 2
TAIR curator summaryEncodes LAX2 (LIKE AUXIN RESISTANT), a member of the AUX1 LAX family of auxin influx carriers. Required for the establishment of embryonic root cell organization.
Alias[LAX2][like AUXIN RESISTANT 2]
Gene coexpression
MR
MR Locus Description
13.6015 Ahg939531 ALC-interacting protein 1
14.6969 Ahg941503 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
15.0997 Ahg476492 Auxin efflux carrier family protein
17.8606 Ahg479286 conserved peptide upstream open reading frame 30
19.799 Ahg476922 Plant protein of unknown function (DUF869)
20.4206 Ahg927923 adenosine-5'-phosphosulfate (APS) kinase 3
22.5389 Ahg481856 sterol 4-alpha-methyl-oxidase 2-2
23.3238 Ahg486880 Leucine-rich receptor-like protein kinase family protein
30 Ahg943624 Nucleotide-diphospho-sugar transferase family protein
37.8418 Ahg479268 receptor-like kinase 902
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression