Detail



ID : Ahg937978

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|937978|scaffold_502169.1
Sequence
TCCAGATCCG AAAACCCAAC AATGGCGTCA GAGAACAACG GATCCAGATC CGAATCCGAA TCCATCACCA AAGCTGATTC CACCGTCGTT GAAATGCCGC CATCGCAACC GAGGAAGATA GCTCTGATCA CCGGAATCAC CGGCCAAGAC GGATCGTATC TGACGGAGTT GCTTCTCGGA AAAGGCTACG AAGTTCATGG CCTGATCCGT CGATCATCGA ATTTCAACAC TCAGCGACTC AACCATATCT ACATCGATCC ACACAATGTC AACAAAGCTC TGATGAAGCT CCACTACGCC GATCTCACCG ACGCTTCCTC TCTCCGTCGT TGGCTCGATG TGATCAAGCC TGACGAAGTC TATAACCTAG CCGCTCAATC TCACGTCGCT GTCTCCTTCG AGATCCCTGA TTACACAGCC GATGTAGTCG CAACCGGTGC TCTCCGTCTC CTTGAAGCCG TCAGATCTCA CACCATCGAC AGTGGCCGGT TTGTCAAGTA TTACCAAGCT GGATCTTCGG AGATGTTTGG ATCAACTCCT CCTCCACAAT CGGAGACGAC GCCGTTTCAT CCCAGATCGC CTTACGCAGC TTCCAAATGC GCTGCTCATT GGTACACAGT GAATTACCGA GAAGCGTACG GTCTCTTCGC ATGTAACGGA ATCTTGTTCA ACCACGAGTC ACCTCGCCGT GGTGAGAATT TCGTGACGAG GAAGATCACA AGAGCATTGG GACGTATCAA GGTTGGTTTG CAGACGAAGC TCTTCCTTGG GAATTTGCAA GCGTCAAGAG ATTGGGGATT TGCAGGAGAC TATGTGGAAG CAATGTGGTT GATGTTGCAG CAAGAGAAGC CAGATGATTA CGTTGTTGCA ACAGAGGAAG CACATACAGT GGAAGAGTTT CTTGATGTGT CATTTGGGTA TTTGGGACTC GATTGGAAGA ATCATGTTGA GATTGACCCG AGGTACTTTA GGCCATCTGA AGTAGATAAC CTTCAAGGAG ATGCAAGCAA GGCAAAGGAA GTGTTGGGAT GGAAACCAAA AGTAGGGTTT GAGACGCTGG TGAAGATGAT GGTTGATGAA GATCTTGCCC TTGCTAATAG GGAGAAACTG CTTGTTGATG CTGGTTACAT GGATGCTAAG CAGCAACCTT GATTTGATCT ATTATACAGA GA 
Length1172
Protein Sequence
Protein Residue
Map Locationscaffold_5: 14689606.. 14690783
Download Sequence
A.thaliana
AGI-codeAT3G51160.1
DescriptionNAD(P)-binding Rossmann-fold superfamily protein
TAIR curator summaryCatalyzes the first step in the de novo synthesis of GDP-L-fucose.
Alias[GMD2][MUR1][MUR_1][GDP-D-MANNOSE-4,6-DEHYDRATASE 2][MURUS 1]
Gene coexpression
MR
MR Locus Description
7.07107 Ahg916356 Protein of unknown function (DUF567)
9.59166 Ahg931560 lysm domain GPI-anchored protein 2 precursor
9.69536 Ahg495531 flavodoxin-like quinone reductase 1
12.9615 Ahg480870 ATP citrate lyase (ACL) family protein
13.6748 Ahg479428 RNA-binding protein 47B
15.2971 Ahg483560 Citrate synthase family protein
15.8745 Ahg486203 guanylate kinase
16.5227 Ahg943730 calmodulin-binding receptor-like cytoplasmic kinase 2
19.4422 Ahg476207 Protein of unknown function DUF2359, transmembrane
27.1109 Ahg312852
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression