| Annotation |
|---|
| Description | jgi|Araly1|479436|fgenesh2_kg.3__2137__AT3G19210.1 |
| Sequence |
AGCGGAGCTC TGGGCTCGTA GGTGTGTCGA CAATGGAGGA AGAAGATGAA GAGATCTTAT CGTCTTCCGA TTGCGACGAT TCTAGCGATA GCTACAAGGA TGATTCTCAA GATTCGGAAG GAGAAAACGA AAACCCTGAC TGCGAAGACC TGGCGGTGGT TTCTCCTTCA TCCGACGCAG ATCGGAAATC TAAGAACGTC AATGATCTTT TGAGGGGTAA TCTAGTTGTG CAACGGCAGC CACTCCTTCC TCGGGTGCTT TCGGTGTCAG AAGGAGCGGC AGTTTGTAGG AAGCCCTTTA AGCCTCCGTG TTCTCATGGT TATAATTCCA CTGGAAAACT TTCTCGTCGC CTTTCAGCTC GAAAACGGTT TGTCCCTTGG GGTTCCTCAA CTCCTGTTGT GGTTGCTTTA CCTACTAAGC TAGAAGCATC AACCAATATT GAGAAAGATG AAGAAGAGGA AGTTGTTTGT CTGCCACCTG ATATTGAACC CTTGATATTG TGGCAATCTG AAGAAGATGG AATGAGCAAT GTAACAACAA TCATGGTGCA TTCATTGCTT GTCCAATTTC TTCGCCCTCA TCAAAGAGAG GGTGTCCAGT TCATGTTCGA TTGTGTTTCA GGATTACATG GTTCGGCAAA TATAAATGGT TGCATTCTGG CTGATGATAT GGGTTTTGGG AAGACATTGC AGTCCATTAC TTTACTATAC ACACTTCTTT GTCAAGGATT TGATGGGACG CCTATGGTTA AAAAGGCCAT TATTGTTACT CCAACGAGTC TTGTCAGTAA CTGGGAAGCT GAAATTAAGA AATGGGTTGG AGACAGGATC CAGCTTATAG CCCTCTGTGA AAGCACCAGA GATGATGTTT TGTCTGGAAT AGATAGTTTC ACTCGACCAC GAAGCGCTTT GCAGGTACTT ATCATTTCTT ACGAGACATT CCGAATGCAC TCATCCAAGT TCTGCAAGAG TGAATCATGT GATCTTCTAA TATGCGATGA GGCTCATAGG TTGAAAAATG ACCAGACACT AACTAACAGG GCTTTGGCTT CATTGACATG CAAACGTCGG GTTTTGTTGT CTGGAACTCC CATGCAGAAT GACTTGGAAG AGTTTTTTGC CATGGTCAAC TTTACAAATC CAGGGAGTTT AGGTGATGCT GCTCATTTTC GCCATTATTA TGAGGCACCT ATAATATGTG GAAGAGAACC TACAGCCACT GAGGAAGAGA AAAATTTAGC TGCTGACCGC TCCGCAGAAC TGAGTTCAAA AGTCAATCAG TTTATTTTGA GGAGAACCAA TGCATTGCTC TCAAATCACT TACCACCCAA GATAATTGAA GTAGTTTGTT GCAAGATGAC GACTCTCCAG TCCACTTTGT ACAACCATTT TATTAGCTCA AAAAATCTTA AAAGAGCACT TGCTGATAAT GCAAAACAAA CCAAAGTTTT GGCTTATATA ACAGCTCTTA AGAAGCTCTG CAATCATCCA AAGCTAATCT ACGATACAAT AAAAAGCGGC AGTCCTGGAA CTGTTGGGTT CGAGAATTGC TTAGAGTTTT TCCCTGCAGA AATGTTCTCT GGGAGATCTG GAGCATGGAC TGGGGGTGAT GGTGCCTGGG TCGAGCTCTC TGGGAAAATG CACGTTCTCT CCAGACTTTT GGCCAACCTA CGTCGAAAAA CCAATGACCG CATAGTCCTT GTATCAAACT ACACACAGAC GTTGGATCTT TTCGCTCAAC TCTGTCGTGA AAGAAGATAT CCTTTTCTGA GGCTGGATGG ATCAACAACA ATCAGCAAGA GGCAGAAGCT TGTTAACCGG TTGAACGACC CAACAAAGGA TGAGTTTGCA TTTCTCTTAA GCAGCAAGGC GGGTGGCTGT GGATTAAATT TAATCGGTGC TAATCGACTT GTTTTGTTCG ATCCCGATTG GAATCCTGCC AATGATAAAC AAGCTGCTGC TAGAGTTTGG AGGGATGGGC AAAAGAAAAG AGTATATGTA TACAGGTTTC TTAGTACTGG AACTATTGAA GAAAAGGTTT ACCAGCGCCA GATGTCAAAG GAAGGGCTTC AAAAAGTTAT TCAGCATGAA CAGACGGATA ACAACACGAG ACAGGGGAAC TTACTTTCTA CAGAGGATCT ACGAGATTTA TTTTCTTTCC ATGGGGATGT TAGGTCTGAA ATCCATGAAA AGATGAGCTG CAATAGGTGC CAAAATGATT CCTCTGGTAC TGAAAACATC GAAGAAGGAA ATGAGAACAA CGTAGGTGAC AATGCTTGCC AGATTGACCA AGAAGACATA GGCGGATTTG CAAAAGATGC AGGATGCTTT AACTTGTTAA AAAACTCTGA AAAACAGGTG GGCACTCCAT TGGAAGAAGA TCTAGGAAGC TGGGGTCATC ACTTTACCTC AAAGTCTGTT CCGGATGCTA TACTGCAAGC TTCAGCAGGT GATGAGGTTA CGTTTGTTTT CACAAACCAG GTAGATGGGA AGCTCGTTCC CATCGAATCA AATGTCAGTC CAAAAACGGT GGAGTCCGAA GAGCACAATC GGAACCAAAC TGTAAATAAG CGTGCCTTTA ACAAACCACA ACAAAGACCT CGGGAACCGC TGCAACCGTT GTCTCTCAAC GAGACCACAA AAAGAGTGAA GTTGTCTACT TATAAGCGTT TACATGGTAC TAGTAACATT GATGATGCTC AGATTAAAAT GTCTTTGCAA AGACCAAATC AAGTTTCTGT AAATCACGAT GATGATTTTG TATGAGATTG AAGTTTTTGA ACCTTGAGAC ATTATTATGC TAATTTTGTG GACATT |
| Length | 2816 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 7808769.. 7814902 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G19210.1 |
| Description | homolog of RAD54 |
| TAIR curator summary | Encodes RAD54, a member of the SWI2/SNF2 family of DNA-stimulated ATPases. Functions in DNA repair via homologous recombination. |
| Alias | [ATRAD54][CHR25][RAD54][homolog of RAD54] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6 |
Ahg919570 | DNA polymerase epsilon catalytic subunit |
| 7.81025 |
Ahg951586 | Maf-like protein |
| 16.2481 |
Ahg335256 | ATP binding microtubule motor family protein |
| 17.2337 |
Ahg331653 | |
| 26.3818 |
Ahg483041 | Ribosomal protein L10 family protein |
| 27.7489 |
Ahg483730 | Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related |
| 32.1714 |
Ahg904413 | phosphoesterase |
| 35.3695 |
Ahg487058 | Spo11/DNA topoisomerase VI, subunit A protein |
| 35.3695 |
Ahg905237 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
| 36.3318 |
Ahg946316 | Pentatricopeptide repeat (PPR) superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|