Detail



ID : Ahg487058

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487058|fgenesh2_kg.6__192__AT5G02820.1
Sequence
CATTCACGAG ATACGTTGAC CTAAAAGAGT AAATTTTCCC GCCACCGTTA GTACCAGAAC TCTCTGGGCC GCCGCGTCTC CGTCGTCGTC GCTGTCTACA GATGGCGGAT AAGAAGAAGC GAAAGCGATC TAAAGATGAC GAGGCGGAGG AACTTCCTTT CAAAAGCATT CTGGAATCAG ATGAAATTAT CACGGAGCTT CTCAAATCAT ATATCTCCTC TTCTATCAAA GCCGCCGCCG GAGCTGGCGG TGCCTCCTCC TCTTCATCGA AACCACTAAC CCTAGCTGAC CTCTCTCTCT CATCTTCCTG CCGTGAAGTC GCAGATCTCT CACTCTCCTC CGTGCAGACA GAGATAGAGA CAGTCATCGT CCAGATCGCC CGTTCCATTC TCGCCGGCGA TGGCTTTTCC TTCAGTGTTC CTTCACGCGC CGCCTCGAAT CAGCTGTATG TCCCGGAGCT CGACCGTATT GTGTTAAAAG ACAAATCCAC CCTCCGGCCA TTTGCCTCCG TTTCTTCTGT CAGGAAAACC ACCATCACCA CTCGTATCCT TGCCCTTATC CACCAACTCT GCCTCAGGAA CATTCATGTC ACTAAGCGTG ATCTCTTCTA CACCGACGTT AAGCTTTTCC AGGACCAGAC ACAGAGTGAT GCTGTGTTGG ATGATGTCTC ATGTATGCTC GGTTGCACAA GGTCAAGCCT CAATGTAATT GCAGCAGAGA AAGGAGTGGT GGTGGGAAGG CTCATATTCA GTGACAATGG AGATATGATA GATTGCACAA AGATGGGGAT GGGTGGGAAA GCCATTCCAC CAAACATCGA CCGGGTTGGA GATATGCAGA GTGATGCTAT GTTCATACTC TTAGTTGAAA AAGATGCAGC TTATATGAGG TTAGCTGAAG ACAGATTCTA TAACCGGTTC CCTTGTATCA TCGTGACTGC AAAAGGCCAG CCCGATGTAG CTACAAGGCT GTTCTTGAGG AAAATGAAAA TGGAGCTTAA GCTTCCAGTG CTTGCCTTGG TGGATAGTGA TCCTTACGGG TTGAAGATCT TGTCAGTATA TGGATGTGGG TCGAAGAATA TGTCTTATGA TAGTGCAAAT TTGACTACAC CTGATATTAA GTGGCTTGGA ATCAGGCCCA GTGATTTGGA CAAGTATAAG ATACCTGAAC AGTGTAGGCT GCCAATGACT GAGCAGGATA TTAAGACCGG GAAGGATATG CTAGAGGAGG ATTTCGTGAA GAAAAACCCT GGGTGGGTTG AAGAACTTAA CCTGATGGTG AAAACAAAGC AGAAGGCTGA GATTCAGGCG TTGAGCTCTT TTGGTTTCCA GTATTTATCA GAGGTTTACT TGCCCCTGAA ACTGCAGCAG CAGGATTGGC TCTGATCATC AGGTTGCTGT CTTCCTGTTC AATTAGAGAC ACCAACAAGT GCACACTACA GATTTCGAGT TTCTGATAAT GTAATTGCTT GTTTCCTAGC ATGTGAATAA TTTGGTTTGA ATTTATGGTT TGAATCTACA CAGAACTGGG AAGGTAGCTG CTCTTTTGTT TATTTAGAAG ATGCGCATTG AGATTATATG CAATCTTTCC TTATTCTTTT CTGC 
Length1604
Protein Sequence
Protein Residue
Map Locationscaffold_6: 737218.. 739056
Download Sequence
A.thaliana
AGI-codeAT5G02820.1
DescriptionSpo11/DNA topoisomerase VI, subunit A protein
TAIR curator summaryInvolved in the patterning and shape of leaf trichomes. Encodes the DNA topoisomerase VI SPO11-3, involved in endoreduplication
Alias[BIN5][RHL2][BRASSINOSTEROID INSENSITIVE 5][ROOT HAIRLESS 2]
Gene coexpression
MR
MR Locus Description
6.245 Ahg887646
9.21954 Ahg905237 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
14.4914 Ahg944393 Transducin family protein / WD-40 repeat family protein
19.1311 Ahg494345 Minichromosome maintenance (MCM2/3/5) family protein
21.2132 Ahg335256 ATP binding microtubule motor family protein
21.4243 Ahg936442 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
23.8328 Ahg483041 Ribosomal protein L10 family protein
28.8617 Ahg494231
31.241 Ahg332862 DNA-directed DNA polymerases
33.1662 Ahg492264 fibrillarin 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression