Detail



ID : Ahg479456

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479456|fgenesh2_kg.3__2157__AT3G19380.1
Sequence
CAAAACATAT TTACGTAGAT GGCATCTCAT GATGTATTAA AAAATCCAGC AGGTAACAAA GTTATAAATG GCACACGTGT GGGCTCATAC CCCAGATAAG TGTCTCGTTC CTCATATTCA CTCTCACAAC AAACAATCTC ACCTTTCTCC TTCTTCTTCT CTCTCTGTTT CTGAATTTTT CTTAATGCCT AGAAATTTAC AACCATTGGA TCTTGGAATC CAAATACCGT ACCATTTCCG ATGTCCAATC TCTCTCGAAC TTATGCAAGA CCCTGTCACC GTCTGCACCG GCCAAACCTA CGACCGAGCC AGCATCGAGT CATGGGTCTC CATCGGTAAC AACACAACCT GTCCAGTCAC ACGCGCTCCT CTCTCCGACT TCACACTCAT CCCCAACCAC ACTCTCCGTC GTCTCATCCA AGAATGGTGC GTCGCTAACC GCTCCAATGG CGTCGAACGT ATCCCTACTC CTAAACAACC AGCTGATCCA ACCTCTGTTC GTGCTCTTCT CAGTCAAGCC TCCGCTATAA CGGGAACTCA CGTCTCTGTT CGTTCACGCG CCGCCGCTCT CCGCCGTTTA CGTGGATTCG CTCGTGATTC TGATAAAAAC CGCGTTTTGA TCGCAGCTCA TAACGCTACA GAGGTTTTGA TTAGGATTCT GTTCTCTGAA ACGACGTCGT CGGAGTTGGT CTCTGAGTCG TTAGCTCTTC TTGTTATGTT ACCGATAACG GAACCGAATC AGTGCGTTTC GATATCTTCG GATCCGGGTC GGGTCGAGTT TTTGACCCGG TTGTTATTCG ATTCCTCGAT CGAAACACGC GTTAACGCCG CCGCGTTGAT CGAGATTGTT TCGACGGGAA CCAAATCGAC GGATCTGAAA GGAATGTTTT CGATTTCGAA TTCTGAATCT GTATTCGAAG GAGTTCTCGA TCTTCTGAGG AATCCGATTT CGTCACGACG AGCTCTCAAA ATCGGAATCA AAACTCTGTT CGCGCTCTGC TTAGTGAAAT CCACGCGACA CATAGCGATC ACCGCCGGTG CGCCGGAGAT TCTAATAGAC AGACTCGCGG CGGATTTCGA CAGGTGCGAC ACAGAGCGTG CCTTAGCGAC GGTGGAGCTA CTCTGCCGAT CGCCGGAAGG ATGCGCCGCG TTCGGAGAGC ACGCTTTAAC GGTGCCGTTG CTGGTGAAAA CGATATTGAG AGTTTCGGAT CGCGCGACGG AGTACGCGGC GGGGGCGTTG TTAGCGCTTT GTACAGCGGA GGAAAGGTGG CGGGAGGAAG CGGCGGCGGC GGGAGTGGTG GTACAGTTGT TGTTGATGGT GCAGAGTGAG TGTACGGAGA GAGCGAAGAA GAAAGCACAG AAGTTACTGA AGCTTCTGAG AGATTCATGG CCTGACTACA ATTCCTTCGC TAACTCCGAT GACTTTGGTT GCAGCAGCCA AGTGGTCCCT TTTTGATTTT TTTCACAGTA ATTATTAATT TTATAATGTT TTTTTTTTTT TTTCTAATTA GAAGGAAAAA TGGTCATTTT TGTGTGTATG TGATGGGAAG ATGTGAAGAA GAAAGATAAT ATACAGAAAC TTTTTGATGA CCATGAATTA GTTTTTTTTT TTTT 
Length1614
Protein Sequence
Protein Residue
Map Locationscaffold_3: 7882381.. 7884037
Download Sequence
A.thaliana
AGI-codeAT3G19380.1
Descriptionplant U-box 25
TAIR curator summary
Alias[PUB25][plant U-box 25]
Gene coexpression
MR
MR Locus Description
25.2587 Ahg933857 protein kinase family protein
37.0675 Ahg490326 Concanavalin A-like lectin protein kinase family protein
41.2311 Ahg496680 CYS, MET, PRO, and GLY protein 2
48 Ahg493365 Protein of unknown function (DUF604)
50.5569 Ahg491086 Protein kinase superfamily protein
65.0231 Ahg895324 cysteine-rich RLK (RECEPTOR-like protein kinase) 34
65.1153 Ahg479553 Protein of unknown function (DUF3537)
66.6633 Ahg481911 Protein phosphatase 2C family protein
67.4833 Ahg492590 ACT domain repeat 7
71.3092 Ahg950964 heat shock transcription factor B2A
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression