Detail



ID : Ahg481911

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|481911|fgenesh2_kg.4__971__AT2G30020.1
Sequence
AAATCGAAAT CGGAATCTAG AAACGATGTC TTGTTCCGTC GCCGTTTGTA ATTCTCCGGT GTTTTCACCG TCGTCGTCTC TATTCTGCAA CAAAGCTTCG ATTCTCTCTT CACCGCAAGA ATCTCTTTCT CTAACTCTTT CTCATCGCAA ACCTCAAACC TCTTCTCCTT CCTCTCCTTC CACCACCGTT TCTTCTCCTA AATCGCCGTT TCGTCTCCGT TTCCAGAAAC CTCCGTCCGG ATTCGCTCCT GCTCCGTTAT CGTTTGGATC TGAGTCTGTT TCTGCATCGT CTCCTCCGGG AGGTGTTTTG AAGAGGAAAC GACCTACAAG GCTTGATATA CCGATTGGTG TTGCTGGATT TGTAGCTCCG ATTTCGTCGG CGGCGGCGGC TGTGGCTGCA ACGCCGAGGG AGGAGAGTAG AGAGGTTGAG AGAGAAGGTG ATGGTTACTC TGTTTATTGT AAGAGAGGAA GAAGAGAAGC TATGGAGGAT CGTTTCTCTG CTATCACCAA TCTTCATGGA GATCGTAAAC AGGCGATATT TGGAGTCTAT GATGGTCATG GAGGAGTTAA AGCGGCTGAG TTTGCGGCTA AGAACTTAGA TAAGAACATT GTAGAAGAAA TAGTTGGTTT AAGAGACGAG TCTGAGGTAG CTGACGCGGT GAAACGCGGT TACTTGACAA CAGACGCAGC GTTTCTTAAG GAGAAAGATG TCAAGGGTGG TTCGTGCTGT GTCACGGCTT TGGTTAGCGA AGGGAACCTT GTTGTGTCTA ATGCCGGTGA CTGTCGCGCT GTTATGAGTG TAGGAGGTGT GGCTAAGGCT CTATCTTCTG ATCACCGTCC GTCTAGAGAC GACGAAAGGA AAAGAATTGA AACCACGGGT GGATATGTTG ATACGTTTCA CGGTGTTTGG AGAATCCAGG GATCTTTAGC TGTGTCGAGA GGGATCGGAG ATGCTCAACT TAAGAAATGG GTTATAGCTG AACCAGAGAC AAAGATCTCG AGAATTGAGC AGGACCATGA GTTCTTGATC TTGGCGTCAG ATGGTTTATG GGATAAGGTG AGTAACCAAG AAGCAGTAGA CATTGCTCGT CCCTTATGCT TAGGAACCGA GAAGCCATTG TTGTTAGCAG CCTGTAAGAA GCTTGTCGAT CTCTCGGCTT CACGAGGCTC GTCGGATGAT ATCAGTGTGA TGTTGATCCC TTTGCGCCAG TTCGTATAGA AGATGAGTGG CATCTTAGAA GATTTTAGAT ATATGATAAC GTTAGAACTT TGGAGGTTTT CTGTGATTTA GTTCTTTTTT TAACTTTGAT TCATTCATTT ATTTATTCTT TCTAACTTAG TGAAAAAAAG CTAAATTTAA ATGTAGCCTA TGATTACTTG TATGATTCGA GCATTTGTCG AAATT 
Length1405
Protein Sequence
Protein Residue
Map Locationscaffold_4: 13235177.. 13236830
Download Sequence
A.thaliana
AGI-codeAT2G30020.1
DescriptionProtein phosphatase 2C family protein
TAIR curator summaryEncodes AP2C1. Belongs to the clade B of the PP2C-superfamily. Acts as a MAPK phosphatase that negatively regulates MPK4 and MPK6.
Alias
Gene coexpression
MR
MR Locus Description
2.82843 Ahg472978 salt tolerance zinc finger
3.16228 Ahg479472 zinc-finger protein 2
3.4641 Ahg908965 nudix hydrolase homolog 21
4.89898 Ahg475300 ARM repeat superfamily protein
4.89898 Ahg945643 dicarboxylate carrier 2
5.47723 Ahg476579 Protein of unknown function (DUF793)
5.65685 Ahg483040 ortholog of sugar beet HS1 PRO-1 2
6.7082 Ahg950731 C2H2-type zinc finger family protein
7.48331 Ahg944463 redox responsive transcription factor 1
8.12404 Ahg472100 Protein of unknown function (DUF793)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression