Detail



ID : Ahg479495

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479495|fgenesh2_kg.3__2196__AT3G19780.1
Sequence
GAGAGCGAGC GGTTTTCCGA TGAAGACGCC CACGCTCCTC CTTCTCTTCC TCTCCTTCTT ATCCGTTATT CTTCCATCGT CAAGTGGGCA AGGCGAATGG GAGATCCTCA CGGAGCAAAA CTTCTCTTCT CAGATCCGTC TCCACCCTCA TGTCCTCCTC TTTGTCACCA CTCCATGGTG TGGTGAGTCC AGATCGCTTA AGCATGAAAT TGCTCAGATG GTTCAAAGTA GGGAGGAATT TGGCTTGTTG AAGTTAATGG TTGTATACAG AAACTCAGAA AAGGTGTTAG CACAAGCCAT TGGTGCTGCC AACGGGATAA CAATTTTGTA CTATCACAAA AGTGTGCCTT ACAACTATCT AGGGAAACTC CGAGCCTCGA ATATATTGTC CTCTATACAT CCTTATCTGA CATCTACTCC TGAAGAACTC CCTCTCAAAC ATTTGAAGTC TCCAAAGAGT TTGAAAGATT TCCTTCAATC ATCTGACAAG GCTTTACTTC TGTTCGAATT TTGCGGATGG ACTACTACGC TGCTATCTGA GCTGAAGAAA AATGTTACTG AAGATAACCT TTGGCAGGAA TGGAACAATA TGTGTGGACT CCAAAGTGGA TTTGGTAAAG TTCCTTGGCT TGAGGATTTT AGCTATGCCA ATGATACTGC TGCTTTGCAG GAACATGGCA GGGTAAATCT GGGTTTTGGA CAGACATGTA ACCATGAAGA GTTCAAGCAA TTTAGTTCAT TCCTCTCGAA ATTGATTGCC ACCACAAAAG AGTTTTCTCT GCCTCCTGAA AGGCAAAAAT TTGGTCTGAT CACAGAAGAA TCATTGGCTT CATCATTTAA TATTGGAAAA TCTGATTCGT GGGCAGCGGT CCTTCAGCTA GCAGGATGTC TACATTGTTC AAAGATTTTC AAGGCCGGGG ACGACATTCA GAGATTTTTA AAGATGGAGA ATCCGATAGT CACAGAGCTG GAGGACGACT GGCAGGACCA TGAGTCATCT TTACCTGCAA GTAAACCCTC AGTTATTCTT TTTGTGGATA GATCAAGTGG GTCCTTGGAA GAGAGGAGAA GGAGTATGAA AGCACTTGAT ACTTTCAGAG AGGTAGCTGC ACAGCATAAA TTGTCTGACA TAAAACAATG GGAGAATGAT ATTAAGTATG AGAAATCCGT TAGCCAGGCT GATAAAAAAT CGGGGTCTGT GTCACTTCCA AAAACTGTCC AAAAGTTTAA GAAAATTAAG TTAGAGAATA AGGTCTCTTT TATGATTTTG GATGGGGATA AACATGTAGC CCTAGATACT GTAGCGCCAG GTATGGAAGG CAGTTCCCTG CAGGAGATAC TGACAAATCT TCTTCACAGA AGAAAAGAAA GTAAATTGAG CTCGCTTGCT AAGGATGTTG GTTTCCGTCT GTTATCTGAT GATGTGCACA TAAAAGTGCT GGATGCGTTA CCGTCACAAA CAGAAGTTGT GTCTAGTCAA GATACAACTT CATCTTCTGC AGAAGGTTCC AGTGAAATTT CTCTTCACCC TAAAGATGCA GATGTGCAGA ACAGAGTCGG TATGAGTTCT GAAGAAAAAG ATGAAATGAA ATCCTCTGAA ACTGAATCCT CCTCCCCTAG TGATGAAGAG CAGGTTACTA CAAACAGGAG TGAACAATTA GTAATGGCAG AAACCGATAA GACTGAGGTT TATTTGAAAA AAAATATTAA TGGAGAGATC AAGGTATCGT TGCACTCAGA ACCGAAGGAA GATCTAGTGC ATAAATTCAC GGGTTCATTT TTCTTCTCTG ATGCAAATTA TGTATTACTT AGGGCTCTTA CTGGTGATGT AAAGATTCCA TCAGCAGTAA TTATTGACCC TGCTTTACAA CAGCACTATG TCCTTCAAGA TAAGTTCAGC TATTCGTCAC TGGTCGACTT TCTTGATGGA TATCTCAATG GAAGTCTATC TCCTTATACA CAGTCTGAAT CTAGCATTCA GACGCCTAAA AAAGCTACAG TTCCACCTTT TGTTAATCTG GATTTTCACG AGGTGGATTC TATTCCCCGT GTCACAGTCA GTACCTTCTC CCATATGGTT CATGCATGGG ATCAATCCAG TGCAGAGAAG GTTCCTTGTC CTCTGTGCCA GGACGTTTTG GTCCTTTTTA GTAATAACTG GTGTGGGTTT TGTCAGAGGA TGGAGCTAGT TCTGCATGAA GTGTACCGAT CACTAAAAGA ATATAAAGCG ATTATACAAG GAGGATCTAC GAACAATCAA AGGTTCAAAT CAGCCGAGAG AAACAAAGTC ACTCCATATG AAGGGGAGAC ATCTGTAACT GACATAACAG AGTTTCTAGC TCGCCATGCG AATAAATCTC GTGAGTTTTT CAGACTCCTT CCTTCTCTGT CTAGAAATGG AAGAAGAAAC TCAAACAAGT CGGATCAATC TTCATCTGCG GTAGACTATA AAGTGACAGA TGGTGATAAA CTTGTTGAGG TCGTTTTAAA GAACAGAGAG CCCGCTGAAA GAGAGGTAAA CCATGACCAG GTCGATTCCG AATCGCCTCC AACACACTCG CTCACAACCG CTCCCCAAGT GAAAACCGGC ACAATCCTGG TCGCTACAGA AAAGCTAGCT GCCTCCCAAG CATTTGCCAA ATCAAAGATT CTGATCATAA AAGCAGGCCC CGAATTCGGT TTCCTGGGTC TAATCTTCAA CAAAAGGATA AGGTGGAAAT CGTTCCCTGA CCTAGGGGAA ACAGCCGAGC TCTTGAAAGA GACTCCTCTA TTGTTCGGAG GTCCCGTCGT GGATCCAGGA ATACCACTTT TAGCTCTGAC CCGAGAGAAA GACTCATCCA CGGACCATGA TCACCCGGAA ATCTCACCAG GCGTTTATTT CTTAGATCAT CAATCCGTGG CCCGTCGAAT CCAAGAGTTG AAATCTAGAG AGCTAAATCC AAGTGAGTAC TGGTTTTTCT TGGGATACTC AAGCTGGAGT TATGAGCAGT TGTTTGATGA GATAGGTCTT GGAGTATGGG ATGTTGATAA CAGTGACATT GACTTTGCCT GGCCTTGATT TTCTTTTACT TTTTTTTTTA AAAAGAATAG AAGATAGTAA AACCCATCAT GTGGTTAACT GTAAGAATAA CACTTAAAAA TGTCTTCTCT ACAATTACAA CA 
Length3162
Protein Sequence
Protein Residue
Map Locationscaffold_3: 8073457.. 8078114
Download Sequence
A.thaliana
AGI-codeAT3G19780.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.73205 Ahg314839 ARM repeat superfamily protein
2.44949 Ahg919385 Protein kinase superfamily protein
2.82843 Ahg493618 O-fucosyltransferase family protein
5.47723 Ahg477381 SIN3-like 1
5.83095 Ahg481505
6.9282 Ahg947562 RING/U-box superfamily protein
8.12404 Ahg949155 Aldolase-type TIM barrel family protein
8.3666 Ahg941601 alfin-like 5
8.48528 Ahg920528 Galactose oxidase/kelch repeat superfamily protein
9.38083 Ahg922436 RING/FYVE/PHD zinc finger superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression