Detail



ID : Ahg941601

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|941601|scaffold_602145.1
Sequence
TCGTTTCTGA GAGAGACGGA CATGGAAGGA GGAGCGTCGC ACTACAACCC TCGAACTGTC GAAGAAGTCT TCCGAGATTT CAAGGGCCGT CGAGATGGCA TCATCCAAGC TCTCACCACT GATGTGGAAG ATTTTTTAAA GCAATGCGAC CCTGAGAAGG AGAATCTTTG CTTGTATGGA TTCCCAAATG AAGTGTGGGA AGTTAACTTA CCAGCTGAAG AAGTGCCTCC TGAGCTTCCC GAACCTGCAC TCGGCATTAA CTTTGCCAGA GATGGGATGC AGGAAAAAGA CTGGCTTTCT CTCGTTGCTG TCCACAGTGA TGCGTGGTTA CTTTCTGTGT CCTTTTACTT TGGTTCAAGA ATTGGTTTTG ATAGAGCTGA CAGGAAGCGC TTGTTCAACA TGATAAATGA GGTTCCTACT GTATTTGAAG TTGTAACTGG AAATGAGAAG AAACAAACAA AGGAAAAGCC CTCTTCAGCA AATCAAAATG GCAACAGATC CAAGTCAAAT TCAAAAGTGA GAGGTTTAGA AGGTAACAGT TCAAAGACGA TACAGGCTAA GGACGAGGAA GAAGGATTAG AGATAGAGGA AGGGGAAGAG GAAGAGGAAG AGGATGAAGA TGAACACGGT GAAACCCTAT GTGGAGCTTG TGGAGATAAC TATGCTTCTG ATGAATTCTG GATTTGCTGT GACATGTGCG AGAAATGGTT CCACGGGAAG TGTGTGAAGA TCACTCCAGC TAGAGCTGAG CATATCAAGC ATTATAAGTG CCCTTCTTGC AGCAACAAAA GAGCACGACC CTAGATGTTT TATTTCCACT AGTCT 
Length825
Protein Sequence
Protein Residue
Map Locationscaffold_6: 8265886.. 8268901
Download Sequence
A.thaliana
AGI-codeAT5G20510.1
Descriptionalfin-like 5
TAIR curator summaryAL5 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.
Alias[AL5][alfin-like 5]
Gene coexpression
MR
MR Locus Description
8.3666 Ahg479495
10.583 Ahg494461 Cyclin family protein
33.2265 Ahg487906 Peptidyl-tRNA hydrolase II (PTH2) family protein
33.8821 Ahg894721 Frigida-like protein
39.598 Ahg323420 ataxia-telangiectasia mutated
40.6079 Ahg478880 cytochrome P450, family 72, subfamily A, polypeptide 7
45.5961 Ahg933578 Ypt/Rab-GAP domain of gyp1p superfamily protein
52.7257 Ahg350108
53.4416 Ahg944648
58.2495 Ahg493978 Disease resistance protein (TIR-NBS class)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression