Detail



ID : Ahg479516

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479516|fgenesh2_kg.3__2217__AT3G19980.1
Sequence
AACGCAAAAG TGTGATTTGC GTTTGAAGCG GCAGAGATCG ATCTGGGATT TTTTTTTCTT TTGCCGTATG TCATTTTGTG GAACTCGAAC CTCTCATTAT TCTCTCTTTC ATCTCCTCCG CTTACGTAAC CCTAACGAAG TCGAAGATTC TCTGGTAGAT CTATCTTGAT TCGATTCGAT TCTTCTTTTT TCCCAGAAAA GTCGCTATTG AATTCGAACG AAAGAGGTTT AGTTTTTTAC CAGTCAGAGG TATATAGATA GGGTTATGGA TTTGGATCAA TGGATTTCCA AGGTTAAAGA TGGTCAGCAT CTCTCCGAAG ACGAGCTTCA GCTTCTCTGC GAATACGTGA AAGAGATTCT GATTGAGGAG TCTAACGTAC AGCCTGTAAA CAGTCCAGTC ACAGTATGTG GTGATATCCA TGGCCAGTTT CATGATCTTA TGAAGCTTTT TCAGACTGGA GGTCATGTTC CCGACACCAA TTACATTTTT ATGGGGGACT TTGTGGATAG AGGTTACAAC AGCCTTGAAG TCTTCACTAT TCTTTTACTT CTTAAAGCTA GATATCCAGC CAATATTACA CTTTTGCGTG GAAATCATGA AAGTAGGCAG CTAACGCAGG TGTATGGTTT CTATGACGAA TGCCAGAGGA AGTATGGTAA CGCTAATGCT TGGCGATATT GCACAGATGT TTTTGACTAT CTTACCCTGT CAGCTATTAT AGATGGCACA GTTCTATGTG TCCACGGGGG CCTTTCCCCG GATGTTCGGA CAATTGATCA GATAAGACTG ATCGAGCGAA ATTGCGAAAT TCCTCATGAA GGGCCCTTTT GCGATCTTAT GTGGAGCGAT CCTGAAGATA TTGAAACATG GGCGGTTAGT CCACGTGGAG CTGGTTGGCT TTTCGGATCC AGGGTTACCA CTGAGTTTAA CCATATCAAC AAGCTTGATC TAGTATGCCG CGCGCACCAG CTTGTACAAG AAGGTCTTAA GTACATGTTC CAAGATAAAG GCCTTGTAAC TGTATGGTCT GCACCTAATT ACTGTTACCG CTGTGGGAAT GTCGCATCTA TATTGAGTTT CAATGACAAC ATGGAAAGGG AAGTGAAGTT CTTCACAGAG ACAGAAGAGA ACAATCAAAT GAGAGGGCCA AGGACTGGAG TTCCGTATTT CCTATGAAGA ATCACACTAT TATATTTGCT GTGATGATGA AGCCATTGCT GCCATTGGCA ATATGTTCAG TGTTGAAAAG GTTAATATAT AATTATATAT ATTATCTATT GATGGGTTTC ACTTACTATC ATTATTTTTG TCCTTTAGGT TACATTTTCC TTATGAAAGT TATAAGTCAA AAACACTTTT GGTATTAGTT TTAGTCATTT TGAGTCTCTC TACTCTTCTT TTCCCCCCAA TCTTTCTTCT GTAATGTTTT TTTTTTCATT GTTCACTTGC ACTGTTTCCT CTATTTTCTG TTGTTGTGAA GATGACATTA ATTCTAAAAT AATCAAACAT CGTTA 
Length1515
Protein Sequence
Protein Residue
Map Locationscaffold_3: 8226622.. 8230155
Download Sequence
A.thaliana
AGI-codeAT3G19980.1
Descriptionflower-specific, phytochrome-associated protein phosphatase 3
TAIR curator summaryEncodes catalytic subunit of serine/threonine protein phosphatase 2A. It can associate with phytochromes A and B in vitro. Mutant plants display an accelerated flowering phenotype.
Alias[ATFYPP3][EMB2736][FYPP3][STPP]["flower-specific, phytochrome-associated protein phosphatase 3"][EMBRYO DEFECTIVE 2736][SERINE/THREONINE PROTEIN PHOSPHATASE]
Gene coexpression
MR
MR Locus Description
4.47214 Ahg482091 ARM repeat superfamily protein
4.69042 Ahg476894 histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific)
6.48074 Ahg951951 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain
8.3666 Ahg929511 phospholipase D P1
10.583 Ahg495713
11.225 Ahg930446 RNA recognition motif (RRM)-containing protein
16.4317 Ahg922436 RING/FYVE/PHD zinc finger superfamily protein
16.9706 Ahg493105 RNA-binding (RRM/RBD/RNP motifs) family protein
17.1464 Ahg928964 Ubiquitin-conjugating enzyme/RWD-like protein
17.1464 Ahg491023 oxidoreductase, 2OG-Fe(II) oxygenase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression