Detail



ID : Ahg479725

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479725|fgenesh2_kg.3__2426__AT3G22104.1
Sequence
TATAACAGTG AACAGAGAGG TGTTTGTTTG GACACGCCTT TGTTGTTGCT TTGGACTCTT TCTTTTTTTA TTTACTCTCA AACTAATTTG TGGGTGCTTC ACCAATAGAC TTGACAGACA TCAAAAGAGA AGACTTATAC AAAATCTGAC AATCACAAAA CCAACAAAAG TTTCTTGCTT CTTTGCTCTT TGTCTTCTTT CTCTTCTCAG CATAAATCCA CACCTCTCTC TCCACTGTTA CTCACTTCTT TCACCACATT TCTTTTCTCT TTTGGGGGAA AAATCAAGAA AAAGAGAGAT AGAATCTAGT TCTACCCAAG AGTGTTTTTA GTTTCTTTCT CTTTTTTTGG CTATGGAAGC TTGTTGCTCT GATCTTGAAG TAGACATCAA TGGAGAAGAA ACTATCTTTC TCAATAAGCA AATCATCTGT GCTTATTCTG GAACGTTAAG GAAACTTTTG GGGAAATCAA CTTGTTCCAA TGGAAATCTC AAGGTGATCT TTAATGATTT CCCCGGTGGA GGGGAGAGTT TCGAGCTTGT TTCGAGATTT TGCTACAATA ACGGTGGATT AGCTGTGATG CCTTCGAATG TAGTTTTCTT GCATTGTGCT GCTAAGTTTA TGGAAATCAC TAAAGTCTTG GAACAAACAG AGAAGTGTAT GGAAGAGATT CGGTATTGGG CTTGGCCAGA GGTTCTTCTC TGTTTAAAAC AGTGTCAAGA AGTTGAAACA TCGCCCGAAG CTGATTCTTT AGCCGCGAAA CTGATGGATG CGTTAGTGGA GAAACTGTGT TTAACTATTG AAATGAGTCC TTCTACTTGT TTCGAGTTTT CTTGTGATAG TAAAACAACA CTAGACAATC TTCTTGTTAC ATCTCCATCG AAATCGAGTC ACTTGTACTA TGTGAATCTC GTTCTTAGAT TCACAAAAGC TTTCCTCGAC GGAGAAAGAG GAGGATTGCA ATTGAAGAAA GTCTCAAGCT TGATTGATCA ATACATAGCT GAAGTAGCAC CTGATCCTTG CTTGAAACCT TCAAAGTTTC TGTCTCTCCT CACACTTGTT CCAGATTCAG CCAGAGAATC CCACGAAGAA ATATATCGTG CTATCGATAT GTATCTCGAG GCTCACACAG GATTAAATGA TGGCGAAAAA CTCAACTTGA TACGAACATT AAGTTACGAA AAGCTTTCAG GAGAATCAAG AGCACACATT TCCCGTAACA CGAAGTTTCA GGCAATTGAG ACACTAGATG AACAACAACA ACAACCGAAG CAGCTCATAC TCCGAATGGA GAAGAATGAG ATTTCAGGAG AAAAAGAGAA GCTGAAGGAA CATATTGAAG GGATTCAGTG GCGGGTAATG GAGTTGGAGA GAGCGTGTTT GAAAATGCAG AATCAAATGG AAGTTATCAA AAAGAGATCC AAGAGCTCGA GCAAAGGAAG TAACAGATCA CTTCCTAAGC TCTGTTCTTG ATTTAGTGAA GCTGTAGCTT ACAAGATCAT ATTTGTACAT AAAGAGTGAT AGAGAGCATA AGGAGTCAAC AATTATAGTT ACAATTTGTT TCTTATGTTT CTTATCTTTT CTTGTGTTGT TTACTGTCAC AACAGTTGTT CGTAAGGAAA AGTAAAGATA GATTCGATTT GATGGAGATG TTGATACAAA CTTAAACCTA T 
Length1671
Protein Sequence
Protein Residue
Map Locationscaffold_3: 9241741.. 9244501
Download Sequence
A.thaliana
AGI-codeAT3G22104.1
DescriptionPhototropic-responsive NPH3 family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
7.34847 Ahg470318 Leucine-rich repeat (LRR) family protein
38.0789 Ahg334149 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein
40.3485 Ahg495292 methyl-CPG-binding domain protein 13
42.3556 Ahg948180 LRR and NB-ARC domains-containing disease resistance protein
42.9884 Ahg921879 VQ motif-containing protein
51.5364 Ahg897626
58.1206 Ahg935792 receptor-like kinase in in flowers 3
67.7274 Ahg482244 receptor like protein 27
74.6458 Ahg326041 structural maintenance of chromosomes 5
76.8375 Ahg493870 dsRNA-binding protein 5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression