| Annotation |
|---|
| Description | jgi|Araly1|334149|fgenesh1_pg.C_scaffold_1000714 |
| Sequence |
ATGGGGACAG AGCTAATGAG AATCTGTGTG AAAGAAGATA GTGATGATTT GCCATCTGTT CCTCCTGGGT TTGAATCTTA TGCTACTTTT ACCTTAAAAA GAGTAGTCCC CGGTACTTCT GATCAAGCCA AGACTGCTGC AATTGAAAGT GTTTCTGCAA CCGAACAAGC TAAGATGGAA GTTGAATCCG ATGAAGCCAA AGCTGCTCGG GCTGTACGCC GTAGGCCTTG GATTAATCAT AGCGGATGTG ATGATGATGA TGATGATGGT GCAAAAAACG ACAATGCTGC ATCTCAAAAT CCTGATCAAA GTTGTACTGC GAAGCCGTCT CTTCCAAAGG GTGTGGTCAG GGGATGTGAA GAATGTAAAG ATTGCCAGAA GGTAACTGCG ACATGGCATC CAGATGAAGC TCGTAGGCCT GACCTTGAAG ACGCCCCTGT ATTCTACCCG ACCGAAGAGG AGTTTGAAGA CACTTTGAAT TATATAGCTA AAATAAGACC GGAGGCTGAA AAGTATGGAA TCTGTCGCAT TGTTCCTCCT CCTTCCTGGA AACCGCCGTG CCCACTGAAA GAAAAGCAAT TATGGGAGGG TTCTAAATTT ACGACGCGTG TCCAAAGAGT TGATAAACTT CAGAATCGTA GTTCAATGAA GAAGATTTCA AAGCTTTCTA ATCAAATGAG AAAGAAGAAA AGAAAGTGCA TGAAAATGGG AATGGATTCT GTCACTAATG GCGTGAGCGA TCCCTGTTCT GTAAGCACTG GAATGAGTGA ACTTGAGACG TTTGGGTTTG AACCTGGTCC AGGGTTTACA CTAAAAGACT TCCAAAAATA TGCTGATGAG TTCAAGGCTC AGTACTTTAA AAAGAGTGAA ACTTCTACAG ACGATAAATG TAAAGTTGAT AATTCAATAG ACTGCTGGGA GCCAGCACTT GAGGATGTTG AAGGTGAATA TTGGCGTATA GTAGATAAAG CAACTGAAGA GATAGAGGTG CTTTATGGTG CTGATCTTGA AACTGGTGTA TTTGGTAGCG GATTCCCCAA GACATCATCA AGTCACAATG CTTCTTCTTC CGAAGAAAAA TATGCAAAAT CAGGCTGGAA CTTAAATAAC TTTCCAAGGC TTCCGGGATC CCTCCTTAAG TATGAGGGCA GTGATATTTC CGGTGTCCTT GTGCCATGGC TGTATATTGG GATGTGCTTT TCTTCTTTCT GTTGGCATGT TGAAGATCAC CACTTGTATT CGTTGAATTA TATGCACTGG GGTGCACCAA AATTGTGGTA TGGTGTTGGG GGGAAGGATG CTGTTAAACT CGAGGAGGCG ATGAGAAAGC ATTTGCCTGA CCTTTTTGAA GAACAGCCTG ACTTACTTCA TAAGCTAGTT ACACAACTCT CCCCGTCAAA ACTGAAAACC GCAGGAGTAC CTGTGCACCG TTGCGTCCAG CATGCTGGAG AGTTTGTCTT GACTTTTCCT CGGGCATATC ATGCTGGATT TAATTCTGGT TTCAATTGTG CTGAAGCTGT GAATGTAGCA CCAGTTGACT GGTTGCCTCA TGGGCAGATT GCCATAGAGT TATACTGTCA ACAGGGTAGA AAAACGTCCA TCTCGCATGA TAAATTGTTG CTTGGGGCAG CAAGAGAAGT AGTGAAAGCC GACTGGGAGC TGAACTTACT AAAGAAAGAT ACTGTAGATA ACTTAAGGTG GAAAGCATTC AGTGGAAAGG ATGGAATTTT GGCAAAAACA CTAAAGGCAC GCATTGACAT GGAACGTACA AGAAGAGAAT TTCTGTGCAA CTCTTCACTT GCATTAAAGA TGCACAGTAA TTTCGATGCT ACCAACGAGA GAGAGTGCTG TATATGCTTC TTTGATTTGC ACCTGTCTGC TGCTGGTTGC CGTTGTTCCC CAGAGAAGTA TTCATGTTTG ACTCATGTGA AGCAGTTGTG TTCATGTCCA TGGGTTACTA AATATTTTCT ATTTCGCTAT GATATCGATG AACTGAATGT TCTTGTTGAG GCAGTGGCAG GAAAACTGAG TTCTGTATAT AGATGGGCGC GTCAAGATTT AGGATTGGCA TTAAGTGCAC AGGTCTCAGG AAGCAAGATG GAGATAGATG AGGAAGAAAA AGTCCACAAG GACCTGAGTC CACAAGTAGC TGCACTTTCA GGGAAAGATT TGCAGTTGAA AATAACATCG AGAGAAGATC TAAGTAAAGA GTTAGAAAAG ACTAGTAAAT TATCAGATAT TAATTTACTT CTGAAAGACA AGGAGGAGCA ATTAACGTCA AGTCACTGTA TGAAGCCTGT CAAAGAAGAA ACTGTTTATG ATTCTTCTGA TCCAAACGTT TCAGGTTGCC AACCATCTGA AGAAGGCATA ATCTCTGTGA CAGCTGCTAA GTCTGCAAGT GGTAAAAAGA ATTCACAGAG TCTACCCAAT GATGTGATAC TCCTCAGTGA TGATGAGCAT GACATACCTA GGAAACGAGG TTCTGTGAGA AGAGATGCAA TTTCTTCTGG CAAGCAATTA GAAGTACGAG ACAGACCAAC CCACGTTTTA GCGTTAGAAG CTTCTGTTAA AATTGCTGCT CCAATTTGTC ATAGGAAAGG AGATTCACTG CGTGATACAC GAACCACTAT ATCATTGCCT ACTAATGACC AAAGAAAAAT GAGTAGGGAT GTACCGAGTT CTACATCGCA CGCGGAAGTT AAGGCTGAGG CTGCTGGGCT TGCTCAGGAT ATATGTAATA GAATGGACAC TAACAGCCAC GGTGGTGGAA AACCTACTAG TTGTAAATCC AAAAACTCTG GAGGTGTGGC TATAGTGGAT GTTGTTGATG GGACAAGAAG TAATTCAGGT ACACCGTCTT GCTCGCAAAA TAATAGTCCT GATAAGTTCA TCCGCCAAAA GGGTCCCCGT ATTGCAAAGG TCGTGAGGAG AATCAATTGC AATGTAGAGC CTTTAAGTTA TGGATGTGTG CTTTCTGGAA AATCATGGTG CAACCGGCGA GCAATATTTC CTAAAGGATT TCGTAGCCGG GTTAGGTACA TGAACATTTT GGATCCAACA AATATGTGCT TCTACATTTC AGAAATTCTG GATGCTGGAC GCAACAGTCC ATTGTTCATG GTTTACTTGG AGAGTAATCC CGGTGAGGTT TTCGTTCATT TGTCACCTAC AAGATGCTGG GAGATGGTAA AAGATAGAGT AAATCAAGAG ATAAGTAAGC AGCACAAAGC TGGAAAATCA GATCTTCCTC CTTTGCAACC CTCTGGGAGT CCTGACGGTT TTGAAATGTT TGGATATTCG TCACCCGCAA TCGTTCAGGC TATCGAAGCA TTAGACGTGA ATCGAGTTTG CACAGACTAT TGGGATTCCA GGCCTTATTC ACGGCCACAA GTTCAGTTCC CTGCAAATCC TCTTCTCAGA GAAGCCAACA CAAGTGTCAG ATCGGATGTG GCAAAACTCC AGCTAAATCC TGGACACCAT TCATTGCCTA CTGGAATAAA CTCTATTCTC AAAGTTCTGT TCAAGAAAGC TAACCTGGAG GAACTAAGCT CACTTCAACA GGTTTTAAGT GAGACTAACT CAAATTTGGT GACCGAAATT GTGAAGGAAG AGATCCAGAA CCGTCGCTGA |
| Length | 3630 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 3090659.. 3096571 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G08620.1 |
| Description | Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein |
| TAIR curator summary | |
| Alias | [PKDM7D] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2 |
Ahg479191 | ubiquitin protein ligase 6 |
| 3.74166 |
Ahg313679 | multidrug resistance-associated protein 13 |
| 6.48074 |
Ahg483530 | guanosine nucleotide diphosphate dissociation inhibitor 1 |
| 10.6771 |
Ahg931346 | |
| 14.7309 |
Ahg492386 | ubiquitin-specific protease 16 |
| 15.2971 |
Ahg489126 | Adaptor protein complex AP-2, alpha subunit |
| 16.9706 |
Ahg477069 | histone acetyltransferase of the CBP family 1 |
| 18.3303 |
Ahg352131 | ubiquitin-specific protease 10 |
| 22.1359 |
Ahg943823 | HEAT repeat ;HECT-domain (ubiquitin-transferase) |
| 22.8473 |
Ahg486593 | RING/U-box superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|