Detail



ID : Ahg479732

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479732|fgenesh2_kg.3__2433__AT3G22180.1
Sequence
GAGAGGCGAT ATTTTCTCAG TCTCTCTTTC CTTTTTCCGC GAGCAACAAC ACTCTTCACT TAATCACTCC GGCGGTGGCG ACGGCAACGT GACGGAGACG TTGTCGTAAA ATTAGGGTTT ATCTTTCCTG GCTTATTGTT GTTGGAGAAG AAGGTATGGT GAGGAAACAC GGTTGGCAAC TTCCCGCTCA CACTCTTCAG GTGATTGCAA TTACGGTGTT TTGCTTGTTG GTGGTCGCTT TCTATGCTTT CTTCGCTCCT TTTGTTGGAG GTCGTATTTG GGAATACGTT TTGATCGGTG TTTACTCTCC TGTGGCTATT CTTGTGCTTG TTTTGTATGT TCGGTGTACT GCAATCAATC CTGCGGATCC AAGGATCATG TCGATATTTG ATACAGGCGT GAACAGAGAT GATATGGTTG GTGCCTTATC GAGGAATTTT GATGAAGCTG GTAGTCAGTT GCAGGCTTCT CCTTCAGTTG TCAGCAGGAG TTCTACCGTA GCAGGAAACT CTAGTGTGAA AGGTTCTGTA GAAGATTCTC AAAGAGTGGA ATCTGTGAGA AGAAGATCTT GCTATAATCC TCTGGCTATC TTCTGTTACG TGTTTGTTTT GGAAGACTGC CGAAAACAGG AAGGGGCGGC GGAACAAGAA GGAAACAGCG AAGAGGCTCT GTTTTGCACA TTGTGCAATT CTGAGGTACG CAAGTTCAGC AAGCATTGTC GGAGTTGTGA TAAATGTGTT GACTGTTTTG ATCACCATTG CAAGTGGCTT AACAATTGCG TCGGTCGTAA AAACTACGTG ACTTTTGTCT CTCTGATGAG TGCCAGTCTT CTCTGGCTCA TTATTGAAGC AGCAGTTGGA ATTGCAGTCA TAGTGCGTGT ATTTGTTAAT AAGCAGAGCA TGGAAACTGA AATTGTCAAT AGACTTGGAA ATAGTTTCTC TCGTGCCCCT TTGGCGGCAG TTGTTGGTCT TTGCACTGCT GTTGCCATTT TGGCATGTTT TCCACTGGGT GAACTTCTCT TTTTCCACAT GCTTCTCATT AAAAAGGGAA TTACAACATA TGAGTATGTT GTGGCAATGA GAGCCATGAG CGAGGCGCCA GATGGAGCAT CTGTTGACGA GGAAATTCAG AATGTGCTCT ATTCTCCCAC TGGGTCTGCT ACAACCGGCT TTAGTGGTGG AAGCTCTCTC GGTTTACCAT ACAAGGGGGT CTGGTGCACT CCACCTAGAG TGTTTGATAA TCAGGATGAA GTCATTCCCC ATTTAGACCC TCGCATGGTC CCGTCGACCG TAGATCCAGA TGCACCTGGA TCAGAGAAAG GCACCAAGGC TCTGAAAAGA CCTGTCAAAC GTAGTGCATG GAAGCTTGCA AAGTTGGATC CAAATGAAGC TGCAAGAGCA GCTGCCAGAG CCAGAGCGTC ATCATCTGTC CTAAGACCAA TAGATAATCG CCATTTACCT GATAGTGAAC TTAGTTCCAT TGGCACACTT AGTATCATCA GTAGTGTAAG CACAGATGCA AATGTGGCTG CAAATAAAGA GATAAGGAAC AATGATCTAA TGTCATCTCT TTCTAGAAAC TCCTTTGCTC CAAGCCAAAG TAGCCGGGAT GAGTATGACA CAGGGAGCCA TGGTATGAGC AATCTTAGCA GTCCAAGCCA TGTTCACGAG TCTGTCACAC TTGCTCCGCT CCCTCAGAAT CCTACAATAG TCGGCAATCG CTTCACTGCA ACAAACCACC ACATGCACTC AACCTTTGAT GATAAGGTGC TGCACAGAGG AAACGACGCG GATCCACTAT TTCTCTCTGC TCCTGCAACT TCTCATCTGA GGGATGTGAG AAAGACATCA GTTGTTTGGG ATCCAGAAGC TGGGAGATAT GTATCAGCTC CTGTAACGAC AACATCTGAG GTCCGCAACA GATTGCTAAA TCCTAGCTCA CAAACAGCCA GCACTCAGAA TCCAAGACCC ATTCTTCCAG CTCATGATTC TTCTTCTGGA TCATCAGCAC TAAGGGATCC TCTTCCTATG CACCAAGCCG AGAGAAGACT GACATATACA GGTGACTCTA TCTTCTATGG AGGCCCACTG ATTAATATTC CGACTAGAGA TACCCCGAGA AGCGGAAGGG GCTTGGTAAG AGAGGTACAA GACAGATTGG CATCAACAGT TCATCGAGAT GCAAGATTCA GAAAGGATTC AACCTCAAAC CAGCTTCCCG TGTTTGCCCC TGGAGGTCTT GGTACAAATT CCGGTTCTAA CATCAAGTAG ATACACCGAC TGTATTTCTT GAAAGGCTCT GATCTTCTAC AAAACACCTT CCCAATTCCT GGAGAGGCTC AAAATCAATG GGGTCTGTGC TGTGTGAGCA TTGAAATTTG AGTTTCCTGG AATTTGTGCG AAGTTCGCGG TCATTTCTCA ACGTATAGGA CTAATTTTCT TGCATGGATT TTGAGTTCCT TTGAAATCCA AAATGTCATC ACTTTTGATT CTTCCAGAAA AGAAAACCAT TCATGTAAAT TCTTCTTTCA CTTATCTCTG CATTTTCATT TCTAG 
Length2555
Protein Sequence
Protein Residue
Map Locationscaffold_3: 9289480.. 9293318
Download Sequence
A.thaliana
AGI-codeAT3G22180.1
DescriptionDHHC-type zinc finger family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
11.4018 Ahg495654 RNA-binding (RRM/RBD/RNP motifs) family protein
14.0712 Ahg922803 Ribosomal protein S7p/S5e family protein
14.6969 Ahg940499 leucine-rich repeat transmembrane protein kinase family protein
15.4272 Ahg484732 methyl esterase 11
20.3715 Ahg494795 SET domain protein 25
23.8747 Ahg945679 WRKY DNA-binding protein 7
25.9808 Ahg477791 Transducin/WD40 repeat-like superfamily protein
38.6264 Ahg311814 GTP-binding protein Obg/CgtA
39.5474 Ahg470500 dentin sialophosphoprotein-related
42.638 Ahg483453 glyoxalase 2-1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression