| Annotation |
|---|
| Description | jgi|Araly1|494795|fgenesh2_kg.8__611__AT5G42400.1 |
| Sequence |
ATGGTTGCGG TTGATTCCTC TTTCTCTAGC CATGGTAGCT TTTATTCTAG TAGAAGGAAG AAAGTCTCTG CTTTGGAACC AAATTTTTTT GGTTCAATGT GTATGGGAGT TTACAGTGAT GATGTTTCAA TCTCTGCAAG GGAAGTAGCT CAAGATTACT CTTGTGACAG TTGTGGTGAT TTGGCGACTG TATCTTCGGC TAGTTGCGAT TTTGATGAAC TGTGTGGTTT GGATTCAGCC TTGGAGATAG GATGTCGGTC CAATGGAGAC TGTCGTGCGG GTCAAGAGGC TTCTGGTAGT GGCATAGCTC CAGGTCTAGA CAAGAGTGTT CCAGGATATA CCATGTATGC AAGCGGTTGG ATGTACGGTA ATCAGCAAGG TCAGATGTGT GGCCCTTATA CGCAACAGCA ACTATATGTT GGGCTATCAA CTGGTTTTTT ACCCGAGGAT CTTCTTGTAT ATCCAATTAT CAATGGTTAT ACTGCAAATT CTGTACCGTT AAAGTACTTC AAGCAGTTTC CAGATCATGT TGCCACTGGC TTTGCATATC TACAAAATGG AGTGATAAGG GTAGCCCCAC CTGTTAGTTC ACTTTCTCTT TCTAGCAGTA ATGCCACAGT CCATCAAGAT GAGACTCGAA CAGAGCATGC AACTTCTGCT ACTCATTTGA TCTCCCATCA GACGTTGCCT CCACAGACCT GTTCTAATGG TTCTGTCTCA GATCAGCTAA CATTAAACCA GGAGGAGTCA AATCTGTTAG CGTCATTCCT CTCATTGGGA AACGAACATG CTTGCTGGTT TCTCGTGGAT GGTGAAGGTA GAAATCATGG ACCACATTCT ATATTGGAGC TTCATAATTG GCAGCAGCAT GGATATGTTT CAGATTCAGC CCTGATACGT GATGGTGAAA ATAAGCTTAG ACCAATCACA TTAGCATCGT TAATTGGTGT ATGGAGGGTG AAATATGGTG ATGCCAATTG TGACGAGTCA GGGACTGGTG TGAGCTTCAT ATCCGAAGTT TCGGAAGAAC TCTCTGTTCA TCTTCAGAGT GGAATAATAA AAATAGCTAG AAGAGCTCTA CTTGATGAAA TCATCAGCAG TGTGATTTCA GACTTTCTTA AGGCCAAGAA AAGTGAAGAG CATCTCAAGT CTTATCCACC CACTTCTGCT GCACATGTTG TTGAATCCAT ATCGTCTCAA GTTATTAATG CGGAGAAAAG TGTTGTCTCA AACACTGAAA CAACAGGCTT TAAGAACATA TTGAATGAGT GGGGTCAGAG TAGCATAGCT ACAGAGTCGC TCAAATATAC TAAATCTGTT GGAAGCATTG AGAACTTTCA GACATCTTGC TCAGCTGTGT GTAGAACGCT TCACAACCAT TGCATGCAAA TCATGTGGAA TGCTGTTTTT TATGATACTG TGGCAACTCA TTCATCATCT TGGAGAAAGA AAAAACTTTG GTTTCGGTCT TCTGATATCT CGACCCTTAA TTACTGCAAA GGTTCCCATA GAAATTATTC AGACAAACCT GAAGCATTTA AGAGTTTTAC TTGTAGGGTG GATTCCTCTT CCTCTAAAAC TGCTTACTCT AATGAACTCG ACTTACCTAC CAATGGAGCC AGCGTTCGTG GAGTGTCATC TAGAAAAGTA ACCTTACCAG ATACTGATGG AACAGAAAGT CTCATAGCAA GCATCTCAGA ACATGTTGAA AGTGAACTCT TTCTGTCTCT TGAAACTCAC CTAACTGATT ATACTAGTAT TCTCATTAAA GATGGAGCGA ATAATACTAC TACTACGGCA CGAGATGGCA AAATGCATGA GGGTTCCTGC CGTGAACAGT ATAATCTGGA AGGGTCTGGT GAAAAGCAGA ATGACTTAAA TGTGGTTTCT GTTAAGTTGC GGTTTTCCAA TGATTTCAGT GATTCTCAGA GACTGTTGCA AGAGGGAGAA TCCTCTGAGC AAATCACATC TGAAGATATT ATCGCTAATA TTTTTAGTAC AACATTGGAG ACATCAGACA TTCCTGTTAG TGATGAACTT GATGATCTGG ATATTCATGA GCCACCACCA CCTGGATGTG AAAGCAGTAT TAAAATGCCA TCTCTGCGCT GTAAGTTTCG GCCTGTAAGG TCCAAGGAAT CCATTCCAGA GATTAAAGCA TATGTTGCAA CGGCTCTATG TAGACAGAAG TTGCACAGTG ATGTTATGAC AGAGTGGATA TCACTGTTCA TGAAGTGTCA TCTCAACGAA TTCCTTGCTT CACGGAAGGG AAGCCATCAA CTTTCTCGTA AAGAAACATT AGCACTGAAG AAGCGCAAAA CTGTTACTCG GAACAAAAAG CTAGTACAGT CTAATATTTC AAATCAAACA GCAGATAAGC CTAGGAACCC ATGTGTGGGA TCGTCTGACG AAATTCTGGT TAAACGATCT AAGAAACTGT CAGATTTTCA TTCCATGAAA GAAGCCGTTA AAGTCGATAC ACCCAGTATA GATTTGTCAG TTCGGAAACT AAGTCAACAG AAGATGAGGA ATACTGAACG GCGGGATCAT TGTATCATAA AGGATGCGAC GAAGTTTCAG AAAGAAAATG TTGCCAAAGA TGCTTTTAGT AAGGTGATCT GTGATAAAAG CCAAGATCTT GAAAGGGCAG ATGAATTTGA TGACGAACTC CTTATAACAA GACTAAGAAG AATATCTAGG AATAAATCAA AAGAGTTAAG AGAACGTAAA AATGCTGCAA AATCCTGTGA GGAGATTTCA GTGTCTGCTG AAGAATCTGA AGAAACCGTT GACCGCACAG ATCATGAGGA AAGTCTTTCA AATAAGTCTT CTCAGAAAGT GCAAAAAGCT CATGTATCAA AGCTAAAGAG AAAGAATATG TCAGATGTCA GAGTCGAAGG TACAAAATCT TCTCGCAATG GAGCGGTCAG AGGTTTTACT GAGATTTCTG AAAAGAAAGT GATAAGGTTT CCCCTCAACA CCGCAGCAAG AGAAGGAAAA AATGCCTCCT GCAATTGCTT TACTAAATTA CTATCTCCAG TAGTTGCTGC GAAGCACGGT CAGGATATGT CAAACCCTAC TGGTAATCCC GAAAGACTCG CTGAAGGAAA AAAAATTGTG GAAAAGTCAA CGTGCAATAT AGCACAGAAG GCCTCATCGC AATCATCAAT ACTAAAGAGA AAGCACCCGT CGGATGAAAA AATCCCCAGT GTACCTTCAC GTCGGAAGTT ATCTCTTTCT TCCAAGGATT CTGATGATGA TGTTGGAAAT GAAGAGAAGC TTCCCTGCGA TACGTCAGAT AAGCTGCAAA AAGGCAATTT CCTACAAATT TTCATAGGTC CGAAGAAATT GATGCGTAGA AGGAAGCTAT TAGCAAAACA TACAACAGAA CGTTCTCCAA TTAAGGATTT GTCAGTGGAT GATGGCAGGC CTAAGTCGAT TGCATTAAAA CCATTGGAAA AACTGAGTTC AAAACCAAGC AAAAAAAAGG TGTTACTGTC ATGTCCAAAG TCTGATGGAT GTGCACGCAC ATCTATTAAC GGTTGGCATT GGCGTGCATG GTCATTGAAG GCTAGTGCTG AAGAGAGAAC CCGTGTTAGG GGAAGTTCTT CTGTACATAT ACAACATTTT GGTTCCAAAA GTAATTCGAC TCAGAACGTT CTTTCTGCAA GAACTAATAG GGCAAAAATG CGTAATCTTT TAGCTGCTGC AGATGGGGCT GATGTCTTGA AAATTTCTCA GTTGAAGGCT AGGAAAAAGC GTTTACGGTT TCAACAAAGC AAGATTCATG ATTGGGGTCT TGTCGCACTT GAACCGATTG AAGCTGAGGA CTTTGTGATC GAATATGTTG GAGAGTTGAT ACGTTCTTCT ATATCTGAAA TACGTGAACG CCAATATGAA AAGATGGGAA TAGGAAGCAG TTATCTTTTC AGGCTTGACG ATGGTTATGT GGTTGATGCC ACAAAGCGTG GTGGCATAGC GAGGTTTATC AACCATTCAT GTGAGCCGAA CTGTTACACC AAGATTATAA GCGTAGAGGG TAAGAAAAAG ATATTCATTT ATGCTAAGCG GCATATAGAC GCCGGTGAAG AAATAAGTTA CAACTACAAG TTCCCACTGG AGGATGACAA AATCCCCTGT AACTGTGGAG CGCAAAATAT GTATTGCTTT TGTGAGCAGG TGCCGTGGAT CGCTAAACTA AGGAGGGACG TGTTTTTTAG AGGAACTGAA TCGGGTGGTT TTTAG |
| Length | 4245 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 6092708.. 6098909 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G42400.1 |
| Description | SET domain protein 25 |
| TAIR curator summary | Encodes ATXR7 (ARABIDOPSIS TRITHORAX-RELATED7), required for histone H3-K4 methylation and for transcriptional activation of Flowering Locus C. |
| Alias | [ATXR7][SDG25][ARABIDOPSIS TRITHORAX-RELATED7][SET domain protein 25] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.47723 |
Ahg495958 | HEAT/U-box domain-containing protein |
| 6.48074 |
Ahg888834 | helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding |
| 11.6619 |
Ahg928570 | defective in exine formation protein (DEX1) |
| 13.0384 |
Ahg312683 | pfkB-like carbohydrate kinase family protein |
| 16.7332 |
Ahg492777 | damaged DNA binding protein 1B |
| 20.3715 |
Ahg479732 | DHHC-type zinc finger family protein |
| 21.166 |
Ahg488346 | SIN3-like 2 |
| 24.96 |
Ahg350042 | glucuronidase 2 |
| 25.4558 |
Ahg477717 | AT hook motif DNA-binding family protein |
| 29.8831 |
Ahg495764 | Insulinase (Peptidase family M16) protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|