Detail



ID : Ahg479940

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479940|fgenesh2_kg.3__2641__AT3G23920.1
Sequence
AAAATGGCGC TTAATTTATC GCATCAGCTC GGAGTACTCG CCGGAACTCC GATCAAATCC GGTGAAATAA CCGATTCATC GTTATCAATT TCACCACCAT CAGCGAGGAT GATGACACCT AAAGCAATGA ATCGAAACTA CAAAGCTCAT GGAACAGATC CATCACCACC GATGAGTCCA ATTTTAGGGG GGACGCGTGC GGATCTGTCG GTGGCGTGTA AAGCTTTCGC GGTGGAGAAT GGAGTCGAAA CCATTGAAGA ACAGAGAACG TATAAAGAAG GAGGGATTGG TGGAGAAGAA GGAGAAGGTG TTCCTGTGTT TGTGATGATG CCGCTTGATA GTGTTACGAT GGGGAACACG GTGAATCGGA GGAAGGCGAT GAAAGCGAGT TTGCAAGCGT TGAAGAGTGC TGGTGTTGAA GGGATTATGA TTGATGTATG GTGGGGTTTG GTGGAGAAGG AATCTCCGGG AAGTTATAAT TGGGGAGGTT ATAATGAATT GCTTGAAATG GCTAAGAAGC TTGGACTTAA GGTTCAAGCT GTGATGTCGT TTCATCAGTG TGGTGGTAAC GTTGGTGATT CTGTCACTAT TCCTCTGCCT CAGTGGGTTA TTGAAGAGGT TGACAAGGAC CCAGACCTTG CGTATACTGA TCAGTGGGGA AGAAGGAATT GTGAGTATGT ATCACTTGGC GCTGATACAC TTCCGGTTCT CAAAGGTAGA ACACCTGTGC AATGCTATGC GGATTTCATG CGAGCTTTCA GAGACAACTT CAAGCATCTT CTTGGAGAGA CCATTGTGGA AATCCAAGTG GGAATGGGAC CTGCCGGAGA GCTGCGTTAT CCTTCGTACC CCGAGCAAGA GGGGACATGG AAGTTCCCAG GGATTGGAGC CTTCCAGTGC TATGATAAGT ACTCATTAAG CAGCTTGAAA GCAGCAGCTG AGGCTTATGG GAAGCCAGAA TGGGGCAGTA CTGGCCCAAC CGATGCTGGT CACTACAATA ACTGGCCAGA AGACACTCAG TTCTTCAAAA AAGAAGGTGG CGGTTGGAAC ACGGAGTATG GAGATTTCTT CCTCTCATGG TACTCCCAGA TGCTGTTGGA TCACGGCGAG CGGATCCTAT CCTCAGCCAA ATCAATCTTC GAAAACACCG GTGTCAAAAT ATCGGTCAAA ATCGCAGGAA TCCACTGGCA CTATGGGACC CGTTCTCACG CTCCTGAGCT CACAGCAGGA TACTACAACA CAAGGTTCAG AGACGGATAC CTCCCGATCG CCCAAATGTT AGCCAGACAC AATGCCATAT TCAACTTCAC ATGTATTGAG ATGAGAGATC ACGAGCAACC TCAAGACGCA CTTTGTGCAC CAGAGAAGCT AGTTAACCAG GTGGCTCTAG CCACGCTGGC TGCAGAAGTT CCTCTAGCTG GTGAAAACGC ATTGCCTAGG TACGACGACT ACGCGCACGA GCAGATTCTC AAGGCCTCCG CGCTGAACCT AGATCAAAAC AACGAGGGAG AACCCCGAGA GATGTGTGCA TTTACTTACC TAAGGATGAA CCCGGAGTTG TTTCAAGCAG ATAACTGGGG GAAATTCGTA GCGTTTGTGA AGAAAATGGG TGAAGGGAGA GACTCCAATA GGTGCTGGGA AGAAGTTGAG CGTGAGGCTG AGCATTTTGT GCATGTTACT CAGCCGCTGG TTCAAGAAGC TGCAGTGGCT CTCACTCACT AGAGAGATAG ATTGTGGCAT GGTTCGATGG TTTATGTTTG TATGCGATTA TAATGAAATG GTTTATATGA TGATGCCGAA AAAGATGTTT AGGCTTGTTG GAGTTTGTGT ATGTATTGTT AGTAAAAATG AAATGTATGC CACAGCTCTG GTTTTTGTCT GGTCAGGTTG TGGCAT 
Length1896
Protein Sequence
Protein Residue
Map Locationscaffold_3: 10902412.. 10905105
Download Sequence
A.thaliana
AGI-codeAT3G23920.1
Descriptionbeta-amylase 1
TAIR curator summaryEncodes a chloroplast beta-amylase. Is necessary for leaf starch breakdown in the absence of BAM3.
Alias[AtBAM1][BAM1][BMY7][TR-BAMY][beta-amylase 1][BETA-AMYLASE 7]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg493778 DCD (Development and Cell Death) domain protein
1.41421 Ahg474819 galactinol synthase 2
1.73205 Ahg495857 Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain
2 Ahg484508 global transcription factor group E8
3.4641 Ahg486731 Protein phosphatase 2C family protein
4 Ahg491272 abscisic acid responsive elements-binding factor 3
5.2915 Ahg489979 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
7.14143 Ahg487943 sucrose phosphate synthase 2F
7.54983 Ahg488004 alpha/beta-Hydrolases superfamily protein
7.74597 Ahg322281 G-box binding factor 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression