Detail


ID : Ahg480360

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480360|fgenesh2_kg.3__3061__AT2G14720.2
Sequence
GAATAAGCGT CTTCTCTAGT CTTCCACTCC CATCTAAGAC GTTGAACAAA CAAATCTCTC GATTTTCTCG GAAAAAAAAA CACTCCAACT ACGAATCTTC GATCATCGAG AGCACATACA AAGACGAAGA TTTCAAATTC AATCATCAAT CATCTCTTTT GAATGATCCT TGCTCCTTAA ATTTGTTGTT GATCCTTCGA ATTTGAGACG GAGATCTCGA AGATGAAGCA GCTTCTGTGT TATCTTCCAT GGCTGCTTCT CTCTCTTCTG GTTTCCCCTT TTAGCGAAGC TCGATTCGTG GTGGAGAAGA ATAGTTTGTC GGTGACATCG CCGGAGAGTA TAAAAGGAAC ACATGATAGT GCAATTGGTA ACTTTGGGAT TCCTCAGTAC GGCGGAAGTA TGGCCGGAAC GGTGGTTTAT CCTAAAGAGA ATCAGAAATC GTGTAAGGAG TTTAGCGATT TCTCGATTTC GTTTAAGTCT CAGCCTGGTG CTTTACCTAC TTTCCTCTTG GTTGATCGTG GAGATTGTTT CTTCGCTTTG AAGGTTTGGA ATGCACAGAA AGCGGGTGCT TCTGCTGTTC TTGTGGCTGA CAATGTTGAT GAACCTTTGA TTACAATGGA TACACCTGAA GAGGATGTTT CGTCTGCTAA GTATATTGAG AATATTACTA TACCTTCTGC TCTTGTTACT AAAGGTTTTG GTGAAAAGCT GAAGAAAGCG ATTAGTGGAG GTGATATGGT TAACTTGAAT CTTGACTGGA GAGAGGCTGT TCCCCACCCT GATGACCGTG TTGAGTATGA GTTGTGGACC AATAGCAATG ATGAATGTGG GGTTAAGTGT GACATGTTGA TGGAGTTTGT GAAAGATTTC AAGGGTGCTG CTCAGATTCT TGAGAAAGGA GGTTTCACGC AGTTTAGACC TCATTACATC ACCTGGTATT GTCCTCACGC TTTCACGTTG AGCCGACAGT GCAAGTCTCA GTGTATCAAT AAGGGAAGAT ACTGTGCTCC TGATCCAGAA CAGGACTTCA GCTCAGGATA CGATGGAAAA GACGTGGTTG TGGAAAACTT GAGACAGCTC TGTGTTTTCA AGGTGGCAAA TGAAACCGGC AAACCCTGGG TCTGGTGGGA TTACGTCACT GATTTCCAGA TCAGATGTCC CATGAAGGAG AAGAAGTACA ACAAAGATTG TGCTGAGTCT GTTATTAAAT CTCTTGGAAT CGATAGTAGA AAAATTGACA AGTGTATGGG AGACCCCGAT GCTGACTTGG ACAACCCTGT TCTAAAGGAA GAACAAGACG CTCAAGTTGG CAAGGGTACA AGGGGTGATG TTACCATATT GCCTACCTTA GTTGTCAACA ACAGACAGTA CCGAGGCAAG TTGGAGAAGA GTGCAGTACT CAAGGCTCTT TGCTCTGGTT TTGAGGAGTC AACTGAACCA GCTATATGCC TCAGCACAGA TATGGAGACA AACGAGTGCT TAGATAACAA TGGTGGTTGT TGGCAAGATA AATCAGCTAA CATAACTGCT TGCAAGGATA CGTTTCGTGG AAAAGTATGT GTGTGTCCTA TAGTTGATGG TGTGAGGTTC AAAGGGGATG GTTACAGCCA CTGTGAGCCA AGCGGGCCAG GGAGATGTAC AATCAACAAT GGAGGTTGTT GGCATGAAGA GAGAGATGGA CATGCGTTCT CTGCTTGTGT GGACAAGGAC AGTGTGAAAT GCGAGTGTCC TCCAGGATTT AAAGGAGACG GTGTTAAGAA ATGTGAAGAC ATTAATGAGT GCAAAGAGAA GAAAGCCTGT CAGTGCCCGG AATGTAGCTG TAAGAACACC TGGGGAAGTT ACGAGTGCTC TTGTAGCGGG GACCTTCTCT ACATGAGAGA CCATGACACT TGCATCAGCA AGACGGGTTC ACAAGTGAAA TCAGCGTGGG CGGCCGTTTG GCTTATTATG TTATCATTGG GACTTGCAGC TGCTGGTGCA TACCTCGTTT ACAAATATAG ATTGAGGCAA TACATGGACT CAGAGATCAG AGCCATAATG GCACAGTACA TGCCACTGGA CAGCCAACCC GAGGTCCCGA ACCACGCGAA TGATGAACAT GCCTGAGAAA GCGAAATGGT CCATATATCT ATTTATTCCC CCGGAAAGGA ATCAATGCGA AGCGTTCTTT TAATTGATGT GGCCCTTGAT GCCGGTGTTT TTTTTTCGCA TCTGTATCTC TGTAACTCTT TGTACCAAAC AGTGTATCCT ATGTTCTTGT CACTTGTGTC CATGTGATTT CTGTAATAGG GAAACTTCGA TGTAGCTTCG GAGAACTGGA CAAGCTAGTC AATAGAATCA AAACATCAAA GTTTTAAAGT TAAATCTTTT AGCCTTGGAC AAGTT
Length2385
Protein Sequence
Protein Residue
Map Locationscaffold_3: 18311183.. 18315490
Download Sequence
A.thaliana
AGI-codeAT2G14720.1
Descriptionvacuolar sorting receptor 4
TAIR curator summaryencodes a vacuolar sorting receptor
Alias[BP80-2;1][MTV4][VSR2;1][VSR4][binding protein of 80 kDa 2;1][VACUOLAR SORTING RECEPTOR 2;1][vacuolar sorting receptor 4]
Gene coexpression
MR
MR Locus Description
2.82843 Ahg328336 RING/U-box superfamily protein
4.58258 Ahg921531 Protein of unknown function (DUF1664)
5.83095 Ahg493153 SCARECROW-like 13
7.48331 Ahg470730 Thioredoxin superfamily protein
8.94427 Ahg483191 glutamate synthase 2
10.8167 Ahg474651 ubiquitin-protein ligase 1
12.6491 Ahg340908 glucan synthase-like 10
14.4914 Ahg934359 PLAC8 family protein
19.1833 Ahg484508 global transcription factor group E8
19.2354 Ahg471818
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression