Detail



ID : Ahg480389

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480389|fgenesh2_kg.3__3090__AT2G15090.1
Sequence
TTCTACTCTT AGGTTATATC CAATGAAGAA CTTAAATATG GTTTTCTTCA AGATCTTCTT CATCTCTTTA ATGGTAGGAT TAGCCATGAA AGGATCTTGG ATCAACCTAG AAGATCTCCA AAACTTCTTC CTCCACCATA TACAGAACAA CCTCCAAACC ATAAGCCTTC TCTCGTTTCT TGTTGGTTTT GTGTGGATCC TCTACATGTT AACCCGTCCT AAACCCGTTT ACCTTGTTGA CTTCTCCTGC TACCTCCCAC CGTCGCATCT CAAAGTTAGT ATCCATACTC TAATGGGACA CGCGAGACGT GCAAGAGAAG CAGGGATGTG TTGGAAGAAC AAAGAGAGCG ACCATTTAGT TGACTTCCAA GAGAAGATTC TTGAACGTTC CGGTCTTGGT CAAGAAACAT ACATCCCCGA GGGTCTTCAG TGCTTCCCAC TTCAGCAAGA CATGGGGGCT TCACGTAAAG AGACTGAAGA AGTAATATTC GGAGCTCTTG ACAATCTTTT TCGCAACACC GGTGTAAAAC CTGATGATAT TGGTATATTA GTGGTGAATT CTAGCACGTT TAATCCTACT CCATCACTCG CTTCCATGAT TGTGAACAAG TACAAACTCA GAGACAACAT CAAGAGTTTG AATCTTGGAG GGATGGGTTG CAGTGCTGGA GTTATAGCTG TTGATGTCGC TAAGGGATTA CTACAAGTTC ATAGGAACAC TTATGCTATT GTAGTAAGCA CAGAGAACAT CACTCAGAAC TTGTACTTGG GGAAAAACAA ATCAATGCTA GTCACAAACT GTTTGTTCCG GGTTGGTGGT GCTGCGGTTC TGCTTTCAAA CAGATCTAGA GACCGTAAAC GCGCAAAATA CGAGCTTGTT CACACGGTGC GGATCCATAC CGGATCAGAT GATAGGTCCT TCGAGTGTGC AACACAAGAA GAAGATGAAG ATGGTATAAT TGGAGTTACC TTGACAAAGA ATCTACCTAT GGTGGCTGCA AGGACTCTTA AGATCAATAT TGCAACTTTG GGTCCTCTTG TTCTTCCACT GAAAGAGAAG CTTGCCTTCT TTATTACTTT TGTCAAGAAG AAGTATTTCA AGCCAGAGTT AAGGAACTAT ACACCAGATT TCAAGCTTGC CTTTGAGCAT TTCTGTATCC ACGCTGGTGG AAGAGCTCTA ATAGATGAGC TAGAGAAGAA TCTTAAGCTT TCTCCGTTAC ACGTAGAGGC GTCAAGAATG ACATTACACA GGTTTGGTAA CACTTCTTCT AGCTCAATTT GGTACGAGTT GGCTTATACA GAAGCTAAAG GACGGATGAA GGAAGGAGAT AGGATTTGGC AGATTGCTTT GGGGTCAGGT TTTAAGTGCA ACAGTTCAGT CTGGGTGGCT CTACGCAACG TTAAGCCTTC AGCTAACAGT CCATGGGAAG ACTGTATGGA TAGATATCCG GTTGAGATTG ATATTTAATT TTATGGTTAA GAGTCCAAAC TATCTTATCT TGTTTATTTT GATTGACATT TTATCCTATG TTTGTTCTTT AAAGAGTTTG CATTGAATAT TTGTTGTTGT CTATTTGTTT GATTTGTTTT TGGTACTTGT TTTAAGTAAG AAGTGATGGA TGATACTGAA TTT 
Length1633
Protein Sequence
Protein Residue
Map Locationscaffold_3: 18636114.. 18637745
Download Sequence
A.thaliana
AGI-codeAT2G15090.1
Description3-ketoacyl-CoA synthase 8
TAIR curator summaryEncodes KCS8, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).
Alias[KCS8][3-ketoacyl-CoA synthase 8]
Gene coexpression
MR
MR Locus Description
8.94427 Ahg480225 xyloglucan endotransglucosylase/hydrolase 4
11.4891 Ahg475658 beta-hexosaminidase 3
13.4164 Ahg483835 Rho GTPase activating protein with PAK-box/P21-Rho-binding domain
19.799 Ahg472083
20.8567 Ahg486953 like AUXIN RESISTANT 1
20.8806 Ahg485285 IQ-domain 21
21 Ahg486504 Protein of unknown function (DUF630 and DUF632)
22.3607 Ahg491546 ARM repeat superfamily protein
23.4521 Ahg491249 Leucine-rich repeat protein kinase family protein
26.9815 Ahg486262 Basic-leucine zipper (bZIP) transcription factor family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression