Detail



ID : Ahg486953

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486953|fgenesh2_kg.6__87__AT5G01240.1
Sequence
TTTTGATACT GTGCTCTGCT TCGGAGAGTG GAGAACGAGA CCTAAAGTAC TCTCTGTGTT TCTTCTTCTC AGACTAAAAG GAAAAAAGAG AATCTATAGC TAATGTCGGG TGAGAAACAA GCGGAGGAGG CAATAGTGGT CTCCGGGGAG GATGAGGTGG CCGGTAGAAA AGTGGAAGAT TCAGCGGCGG AGGAGGGTAT TGACGGCAAC GGCGGCGATG GATTTAGTAT GAAGAGCTTC CTCTGGCATG GCGGGTCCGC TTGGGACGCC TGGTTTAGCT GTGCATCAAA TCAAGTGGCA CAAGTGCTGT TGACGCTGCC GTATTCGTTC TCGCAGTTGG GAATGTTATC AGGAATATTG CTTCAAATAT TCTATGGATT AATGGGATCT TGGACTGCTT ATCTCATCAG TGTTCTTTAC GTCGAATATC GTGCCCGTAT GGAGAAACAA GAGGCCAAAT CCTTCAAAAA CCACGTTATT CAATGGTTTG AAGTGCTTGA TGGGCTGCTG GGTCCGTACT GGAAAGCAGC GGGGCTCGCA TTTAATTGCA CCTTCTTGTT ATTCGGATCA GTCATCCAGC TCATTGCTTG TGCTAGCAAT ATATATTACA TAAACGATAG GTTAGACAAG AGGACATGGA CTTATATATT TGGTGCTTGT TGTGCCACGA CCGTTTTCAT ACCATCTTTC CACAATTACC GTATTTGGTC TTTCCTCGGC CTTGGCATGA CCACCTATAC CGCTTGGTAC CTCACCATCG CCGCATTTCT CCATGGTCAG GCGGAGGGTG TGACACATTC CGGTCCGACT AAGCTTGTGT TGTACTTCAC CGGAGCCACC AACATCCTCT ATACCTTCGG CGGACACGCC GTGACTGTGG AAATAATGCA TGCGATGTGG AAACCAAGGA AGTTTAAGAG CATCTACTTG ATGGCAACTC TGTACGTCTT CACATTAACG CTTCCGTCAG CCTCCGCCGT CTACTGGGCT TTCGGCGACC AACTTCTCAA CCACTCAAAC GCTTTCTCTC TCCTCCCTAA AACGCGTTTC CGTGACACCG CTGTTATCCT CATGCTCATC CATCAGTTTA TAACGTTCGG GTTTGCGTGT ACACCATTGT ACTTCGTATG GGAAAAAGCG ATCGGAATGC ACCACACGAA GAGCTTATGT CTAAGAGCGC TGGTGAGGTT ACCAGTGGTG GTTCCGATAT GGTTTTTGGC CATCATTTTT CCGTTTTTCG GGCCAATAAA CTCGGCAGTT GGAGCCTTAC TAGTTAGCTT CACCGTCTAC ATTATCCCTG CCTTAGCCCA CATGCTCACC TACCGCACCG CCTCTGCCCG CCGGAACGCG GCGGAGAAAC CACCGTTCTT TATCCCTAGC TGGGCCGGAG TTTACGTAAT AAACGCTTTC ATAGTGGTTT GGGTCCTAGT TCTCGGGTTC GGGTTTGGCG GATGGGCCAG CATGACCAAC TTCATCAGGC AAATTGATAC TTTTGGTCTC TTTGCCAAAT GCTATCAATG CAAACCGCCA CCAGCTCCAA TCGCCGCCGG ACCTCACCAC GGCCGTTAAG ACGTGTGAAA GTGTGATTGA ACCCTTTTTT CCCCTTTTGT ATGAAAGAAA ATATCTGTAA TTCAGCGATT TAACGTGATT AGGGAGCTGG TGCTGTTGTG TGTTGTCACG TGCCAATCTT CAGTTTTATG ACAGACTAAT ATCTCTTCCT AACTGGTAGA AAACAACTGG ATGATGACAA AATTGTTATC ATTTTTA 
Length1767
Protein Sequence
Protein Residue
Map Locationscaffold_6: 335810.. 339807
Download Sequence
A.thaliana
AGI-codeAT5G01240.1
Descriptionlike AUXIN RESISTANT 1
TAIR curator summaryEncodes LAX1 (LIKE AUXIN RESISTANT), a member of the AUX1 LAX family of auxin influx carriers. Required for the establishment of embryonic root cell organization.
Alias[LAX1][like AUXIN RESISTANT 1]
Gene coexpression
MR
MR Locus Description
12.4097 Ahg484109 Microtubule associated protein (MAP65/ASE1) family protein
16.3401 Ahg480225 xyloglucan endotransglucosylase/hydrolase 4
17.0294 Ahg488873 tubulin alpha-5
20.8567 Ahg480389 3-ketoacyl-CoA synthase 8
22.2486 Ahg935712 AMP-dependent synthetase and ligase family protein
36.6606 Ahg471399 Nucleotide-sugar transporter family protein
38.5357 Ahg473518 RNA-binding (RRM/RBD/RNP motifs) family protein
40.694 Ahg473169 GDSL-like Lipase/Acylhydrolase superfamily protein
42 Ahg483684 FASCICLIN-like arabinogalactan protein 8
46.2817 Ahg472226 tubulin beta-5 chain
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression