Detail



ID : Ahg480395

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480395|fgenesh2_kg.3__3096__AT2G15290.1
Sequence
AAAATATGCA GTCACTACTC TTACCGCCGG CGAGCTCCTC CGGCGTATCC GCGGTTGCGC TACGACCAGG TGTCCAGCAC TCATTCAACC ACCAAAGCCT CTCTACTCGC TCCCAGCCAT CGCTTAATCC ACTTCTCTTC GCTCCGAAGA GGAAAGCCAC CATCTCCTCA TACCAATCGC CACCGTCTTT GTCCGTCTAC GGTTTCCAAA TCGGAGGATC TAAACCTAGT TTCGCACCAT CCACTGTGGC ATTTTCCTCT TCGACGTCTC CTTCTTCCGT TTCCGGTGAT AATGAGGTCG ACAAAGCAAA ACTCGCTCAG GTTGCAAAGA GATTGGAGAA GACTTCTAGG TACTTTAAGA GGCTGGGGAG TATTGGTTTT TGGGGGCAGC TTGTGTCAAC TGTTGTGGCG GCGGTGATTC TATCCTTCTC AATTGTTGTA ACTGGGAAAC CTACTTCACC TGCTACTTTC TATGCTACTG CAAGTGGGAT TGCTGCTTCG TTTGTCTCGG TTTTCTGGTC GTTTGGGTAT ATTCGGCTCT CAGAGAGGCT CCGTCGAACT TCCATCGACC CTGCCAAGGT AACCCCTCCT CGTGCTGATG TTGTGAAAGG TTTGAGGAGC GGGATTATGG TAAATATTTT GGGAATGGGG GCAGCACTTC TCGGGATGCA AGCAACGGTT GGATTTTTAG TTGCAAAGGC TTTAACAACT TCAGCAAACC CTTTCTACCA GGGAGTCTCT CAGGGATACA GCCCCGTTCT TGCTCTTGAT GTCTTCCTAG TTCAGGCATC GGCGAACACC TTACTCTCTC ATTTCCTTGG CCTTGTTTGC TCATTGGAGC TGTTGCGGTC TGTGACAGTG CCCAATTCGG AATCTGTTGT AGTTCCTAAG GTTGCTTGAG TTTCTGCCTT TTTCGGCCTC ACTTCATGTA TTCATAAACG TTGAAAGCTG GGGCTTGTTT CCTTTTATAA CCGAGAACCA ACCATTGCGG ACTCAATGGC TTTATTAGCA GCATTACTGA ACTACAAAAC TAAAAATCAC AATTCCACAT AAGAGGATAA 
Length1060
Protein Sequence
Protein Residue
Map Locationscaffold_3: 18705699.. 18707547
Download Sequence
A.thaliana
AGI-codeAT2G15290.1
Descriptiontranslocon at inner membrane of chloroplasts 21
TAIR curator summaryEncodes a protein located in the chloroplast inner envelope. The study of mutant defective in the gene product suggests that the protein is involved in the translocation of protein across the envelope membrane into the chloroplast stroma.
Alias[AtTic21][CIA5][PIC1][TIC21][TRANSLOCON AT INNER MEMBRANE OF CHLOROPLASTS 21][CHLOROPLAST IMPORT APPARATUS 5][PERMEASE IN CHLOROPLASTS 1][translocon at inner membrane of chloroplasts 21]
Gene coexpression
MR
MR Locus Description
8.48528 Ahg335306 Small nuclear ribonucleoprotein family protein
11.4455 Ahg481708 chaperonin-60alpha
12.8062 Ahg493880 ribosomal protein large subunit 27
13.5647 Ahg474279 ATP synthase epsilon chain, mitochondrial
14.6969 Ahg933276 NAD(P)-linked oxidoreductase superfamily protein
17.8885 Ahg489546 Ribosomal protein L18e/L15 superfamily protein
21.5639 Ahg940809 Ubiquinol-cytochrome C reductase iron-sulfur subunit
22.2486 Ahg933697
22.9783 Ahg888595 ATPase, F0/V0 complex, subunit C protein
25.1396 Ahg890983 Regulator of Vps4 activity in the MVB pathway protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression