Detail



ID : Ahg480500

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480500|fgenesh2_kg.3__3201__AT2G19710.1
Sequence
ATTCTTCTTC TTCTTCGTCT TCTCTAAATC AATTCCCCGC GAAAAATTCC ATTCTTCAGA TCATAGATTT GCGTCTGATC TTCATAACAA GCCAAAAAAA TCTAGCTTTT TTTTTACCCT GATTCGATTT TTTTTTTGTG ATAAATTTCG TGTCCATGAA GAAGGTTCTT CAACGAGGTT TTAAGCCTGC TAAATGCAAA ACAGCTCTGC AAATGGCGAA TTCACGCCTG AAGATACTCA AGAACAAAAA GGAGATTCAG ATTAAACAGC TGAGGAGAGA ATTAGCTCAA TTGCTCGAAT CCGGACACCC TACTGCTAGA ATTCGGGTGG AACATGTGGT TAGGGAAGAG AAGACAGTGG CTGCTTATGA GCTCATTGGA ATATATTGTG AACTTCTTGT TGTTCGTTTG GGTGTTATTG AGTCACAGAA AAACTGCCCC ATTGATCTGA AAGAAGCTGT CACAAGTGTC TTGTTTGCTT CACAGAGGTT ATCAGATGTT CCAGAGCTCT CAGAAATCTT TAAGCAATTC ACAACCAAGT ATGGGAAGGA TTTTTCTACG GCGGCTATTG AGTTGCGTCC TGATTCTGGT GTGAGTCGTC TGTTGGTGGA AAAATTGTCT GCCAAAGCCC CTGATGGTCC AACAAAGGTC AAAATTTTGA TGGCAATCGC TGAGGAACAT AATGTCGTCT GGGAGGCGCA ATCTTTCGTT GAATCAGATC CAAAAGATAC TGAGTTGTTG AGTGGAGCAA GCTCGTTTCA GCCAGCGAGT AGTATGAACA TGGATTCATC TATAAACTCA AACAAGGAAC AGCCTCCAAA CGTCCCAGCT CCAGCTACTG TCAATGCTTA TCATGGATCA AGTGAAAGAA ATCATTTCCC AGAGAACTCT TATGCAAATG GGGGAAGATC TTCAAGCCGT AGCAATAATG TTACTTCTGG GAAGGCTGAT GACTACTATC ATCCAAATGC GAGACCTTCT CGACCTAGGC CTGATGAAGG AGAATGTAGA AATCCAAATC ATGGCTATGC AAATTCATCT TCAAGAACTA AGAATAAGCG GGAAACAGAA TTTGTTAGTT CCACAGATGC TGCTGAAGCT GCCGCTGAAG CTGCTGAAAG AGCAAGTTTC GCTGCTAGAG CAGCTGCCGA ACTTTCGAAC AAAGAAAGGA TGATGAGGCA GGATTCAACA GAGTCGCATA TATCCTCTGC ATCTGTAAAT CTCAGAAACG AGCCTTCACA TCGACGTAAC CGATCGAATG CACAAAGTGA AAGTTATTCT GAAGATCATT TTTCGCCTAG ACGAAATGTT GGAATGCAGT ATGAAGATAT GGACAGAACC CGGCAAGATA GATATGATAA GGCAGAGGAA TCTGAGATTC CTCCTGTAGA TCAGTCATCA GGAAGACATT CCCTGGATAA CTCGAGAAAT AATGGTTCCT TTGGTAAAAA AGGTAGAGAG AAGCAGCCAA GTCAGGATGA GACAGATTTA AATGTTGGTT ACTCAGAAGA TGTTCACCTC AGGAAGCAGT CAAGCCGGGC TTCATCACAT TCACATTCAC ATTCAAGCAA TTATTCTGAT GAGAATGACC TTGCCTCAGA TTATATGAAG TCACCGAGCA TCGTGGAGGA AAACATATTT GCCACTGAAT ATGATCACCA ATCTCAGAGC AGCTTTAAAG ATATAGATTC CCATGATCAT GGACATAGTT CATTTTTTGA TCAACCTAAA TTTGATGCGG AAGATAATCA TTATGATGAA ATTGATGTAG GATTCTCATT GCTTGGCAGC AAAACATCTG CTTCAGCGGC TTCGTGGAGC TTCAAAGAAG ATCTTAGTAA GTCCTCATAT GGAAAAAACA GCAGCTCGAG CTCACAAGTT TTCCAAGAGA ACCTAAGTTC CCCATTATTT GATGATGTCT CTACAAGTCC TCCTGCATCT TACCACGAGC CTGACCCACA TGCCAAGTTT GACAATTATG GTCCAAATTC AGAAAGCGAC GGCGATCAGC CAAGGCATAG AGGCAAAGTT TCTGGAGATG TACATGAGAA GGGGATTCTG ACATCTGATC GATCTCAGAA ATTTAAAGTC TCTGATTCTG ACGGACAGGA ATTTTTCCCT TTAGACACAG AGGAACACAA AGATAATTTG AGGAAACAGG AAGAATCAGA TTCAGAGTCA GAGCCTCAGC TTGGTCTGAG GCTTGGAACT TTGGGCGGTG GATTTAGGAA CAAAAAGACA CTCCCACCCT ACACAATGAG TTTGGCATCG TCCAAGTCTG AAAAGAAATA TATCCAAACC GATGATTTTG GTCAGTCTAG CAGAAAAGAT CTTTACAGTA AGAAAGCAAG CAACACCGAG ATGAGACCTA GTTTTATGCC TCCTCATCCA TCTTCTAGTG ATGAAGACGA CTCAGACATG CAACTTCCAG TAAGAACAAA AACAAAATCC GATTCCTTAT TTAGTCATGC CCGTGTCAAC CTTGAAGACT CGGATGAAGA AAAACTCTCA ACTCGATCTT CTTCAAGAAG TCAAGAGAGG AGTCGTAAGC CATCAACGGG AATGAGAGAT CACAAGAGAA CAAACTTCAA GACGCCAGTT TCATCATCGT CTGAAGATGA GGAAGAAGTC GAAAGAGAGG CTGCACACAT CAATGCCAAG CCAAATAAAA CAACCGGGTA CGGGTTCTCT CTAAGGACAA AGGGCCAATC GAAAGCTTAT GAGAAACATT CTTTACCAGT GACAACGAAG AAAACCGACA AAGAGTCTCA TGATCAGCCA TCTCCAAGGC ACAAGACAGT AACTTCAAGC CCTGTTTCAC AAAGTGTAAA ATCACCCGAT CCAGAAACCC CATCAAGGGA GAGAGCTAGT CACGTTCATC CCAACCTCCC AGAATATGAC GATATCTTTG CAAGGCTCGG GGCCCTTCGT GCTCCTAATC GACGCTGAGT ATGCTCATCT TGTCCGTCTG TTCATATATT TATTCTTTGC CACAGAGACC AGTCCCCCTC ATTCTTTACT CTGACTGAAT TTGATATTCT TACACATTAT ACATATTGAA GCAGTGGTGT GATTCTGCTT GGTCGTGATT GGTGTTCCTT GTCTATTTTA TTTTTTGGTG TGGATACATA GAATAGGAAA TAACTATTTG CGAAGAAGAT TTTTATAATA ACATTCGAAA TGTTGTCACA ATAGAAATGA ATTTTGTTCT CT 
Length3212
Protein Sequence
Protein Residue
Map Locationscaffold_3: 19757548.. 19761500
Download Sequence
A.thaliana
AGI-codeAT2G19710.1
DescriptionRegulator of Vps4 activity in the MVB pathway protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8.12404 Ahg934727 Protein of unknown function (DUF506)
9.53939 Ahg485145 PLANT U-BOX 39
12.6886 Ahg910099 ethylene response sensor 2
17.0294 Ahg494931 defense protein-related
17.9722 Ahg485608 syntaxin of plants 122
21.4243 Ahg332487 Calmodulin binding protein-like
21.5639 Ahg929738
27.9285 Ahg942295 F-box family protein
29.2916 Ahg345050 zinc finger nuclease 2
31.8119 Ahg475391 Uncharacterised conserved protein UCP031279
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression