Detail



ID : Ahg345050

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|345050|fgenesh1_pg.C_scaffold_4001392
Sequence
ATGTCAGAAA CTCAGCAGCA GGTTCAGAAC TCTACTGGGT CGATTCGATC TCCCGAGAAA ATTCAAGATA CCTTCAGGAG GATGAAAGTT AATGAAGACA ATATGGAGCA ATCTAGTCCA TATCCTGATC GTCCCGGTGA GCGAGATTGT CAGTTCTTTC TGAGAACTGG GCAGTGTGGC TATGGAAACA CCTGTCGGTA CAATCACCCT CTTACTCATC TTCCACAGGG TGTTATTTAT TACAAAGACC AATTGCCTGA GAGGATTGGA CAGCCTGACT GTGAGTATTT TCTGAAGACA GGAGCCTGTA AGTATGGCCC AACATGTAAA TATCACCACC CAAAGGACAG GAATGGAGCT GGACCCGTGC TGTTCAATGT TCTCGGTTTT CCTATGCGAC AGGGTGAGAA GTCATGCCCG TATTACATGC AGACAGGATT GTGTCGATTC GGGGTTGCCT GCAAATTCCA TCATCCTCAT CCTCAGCCTT CTAATGGCCA CTCTGCATAT GCAATGTCCA GCTTTCCGTC TGTTGGTTTT CCTTATGCCA GTGGAATGAC AATGGTGCCT TTGCCTCCTG CAACATATGG AGCTATGGCA CGTCCTCAAG TTCCTCAGTC TCAGGCCTAT ATGCCCTTCA TGGTTGCACC TTCCCAAGGC CTTATGCCTC CTCAAGGCTG GGCCACTTAC ATGGCTGCAT CTAACCCCAT TTACAGTGTG AAAGCTCAAC TTGACTCCAG TTCTAGTGCA TCGGTGCCTG TGGCCGTGAC ATCACATCAT CACAGTTTTT CTGAAAGAGC TGAATGTAGG TTTTTTATGA ACACCGGAAC ATGTAAATAT GGAGATGATT GCAAATACAT TCATCCGAAA GAAAGGTTGT TACAATCACC ACCAAATCTC TTGAACCCTA TTGTACTTCC CGCAAGACCA GGACAACCAG CATGTGGTAA CTTTAAGGCC TACGGATTCT GCAAGTTTGG AGCAAGCTGC AAATTTGATC ACTCAATGCC ACTAAACCCT TATAACAATA CGGGCTTGGC CATGTCTTCT CTGCCTACTC CTAATCCTTA TGCTCCACCT GTTTCAACTA ATCTGAGGAT CTCATCGCCA CCAAGCCGCC CTGATTCGAC TACCCTATCC AATGGTAAAC CCGCTGCTGC AGAGACTCAA AGCTTGGAGA CTGAGAAACA AGACGATAGT CCTGCACAAC CAGAAAAGTC AGAAGTGCAG GACTCATTGC CACCAAGCCG CTCTGATTCA ACCTCCCTAC CCAATGTTAA ACCTGATTCT GAGAATCCGA GTTCAGAGAC TGAGAAACAA GACGATAATA CTGCACAACC GGACAGCTCA AAAGTGCAGG ATGCATCTGA TAAATCTACA TGA 
Length1383
Protein Sequence
Protein Residue
Map Locationscaffold_4: 14808231.. 14810788
Download Sequence
A.thaliana
AGI-codeAT2G32930.2
Descriptionzinc finger nuclease 2
TAIR curator summaryEncodes a zinc finger protein.
Alias[ZFN2][zinc finger nuclease 2]
Gene coexpression
MR
MR Locus Description
4.47214 Ahg479829
7.48331 Ahg491566 HOPW1-1-interacting 2
8.06226 Ahg475300 ARM repeat superfamily protein
13.2288 Ahg491705 NAD(P)-binding Rossmann-fold superfamily protein
15.0997 Ahg951254 EXORDIUM like 2
17 Ahg472592 alpha/beta-Hydrolases superfamily protein
21.7256 Ahg930138 UDP-glucosyl transferase 71B1
21.9773 Ahg935227 Calcium-binding EF-hand family protein
28.9828 Ahg478870 LRR and NB-ARC domains-containing disease resistance protein
29.2404 Ahg495435 conserved peptide upstream open reading frame 50
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression