Detail



ID : Ahg492485

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|492485|fgenesh2_kg.7__1918__AT4G23840.1
Sequence
AAGATCAGAA ATTTCAGCGA TTGGAGATGG AGAGTGCATT GGTGCGTCTA TGCATAGAGG AAGCTTGTAA GAGCGGAGAT GCGGTGGAAC GATGGCGACT TCAGCGGCGG AGTCTTGAGA GGCTGCCTCC TCACCTTGCC GATGCTCTCC TCCGTCGCCT TCTCCACAAG CGGCTTCTTT TCCCTTCGTT ACTCGAAGGA TTTAAACATT CTGTAGAGAA TATAGATCTC CGAGGCGAAA GCTCAATTAA CGCTGAATGG ATGGCTTACA TTGGAGGCTT TGTTAATCTA ATTTCTCTAA ATCTTTCAGA TTGCCAGAGA ATCAACAGTT CCACCCTCTG GCCGATCACA GGATTAACAA GTTTGACAGA GTTGGATCTT TCAAGATGCT TTAAGGTTAC GGATGCTGGT ATAAAGCACC TCCAATCTGT TGTAAATCTG AAAAAGTTGT GGATTTCACA GACAGGTGTT ACTAAAGTTG GAATTTCTCT TCTTGCTTCA CTTCAAAAGT TGTCTCTTTT GGATTTGGGC GGCTTACCTG TAACTGATCA CAACTTGATT GCTCTTCAGG CACTGACAAA GCTAGAGTAC CTTGACATCT GGGGAAGCAA CGTAACCAAC CAAGGAGCTA TCAGTATTCT CCAATTTTCA AACTTGAGCT TCCTAAACCT CTCGTGGACA AGCGTCACAC AGACTCCAAA CATACCGCAC CTTGAATGCT TACACATGAA CATGTGCACC ATTGTCTCCG AACCAAAAAC TCATTGCTCA TTAGCTTCCT TGAAAAAGCT AGTTTTATCG GGAGCTAATT TCAGTGCCGA AACAGAGGCC TTGTCCTTTA CCAACAAAAG CTCTATAACC TACTTAGACG TTTCCAAGAC TTCCCTCCAA AACTTCAGCT TCTTAGAAAC TATGATTAAC CTAGAACATC TTGATCTGAG CTCCACAGCT TTCGGCGATG ATTCTGTTGG GTTTGTAGCA TGTGTTGGTG AGAATCTGAG GAATCTTAAT GTCTCGGATA CAAAAATTAC TTCTGCTGGG GTTGGGAATC TTGCAGGACA TGTGCCGCAA CTCGAGACAT TCTCTCTGTC TCAGACATTT GTCGACGATC TTTCCATCTT GCTTATCAGC ACCATGATGC CTTGCGTTAA AGCCCTTGAC TTGGGCATGA CCAGTATCCG AGAAGAACAA GCAGAGCCGT CGTTAGCAGC ACTACAGTCT CTAACTTCCC TTAAAACCCT GAGTCTAGAA CATCCGTACC TGGGCGACAC AGCTCTTTCC GCTCTAAGTA GCCTTACTGG ATTAACACAT TTGTCCCTAA GAAGCACATC CCTCACAGAT TCCACACTCC ACCATCTCTC CTCTCTTCCA AACCTAGTCA GTCTCGGAGT CCGAGATGCA GTTTTGACCA GCAATGGTCT CGAGAAGTTT AGGCCGCCTA AAAGGCTGAG AACACTAGAC CTCAAAGGTT GTTGGCTTTT AACCAAGGAT GATATCGCTG GTCTCTGCAA AAGGTACCCT CACATCAAAG TGAGGCATGA GCATGACAAC TCTTCTTCTC TCGACCAAAA CCAACTTCTT CCTCGGTCAT CCACGCCACA GAGTTTCGGA AAGGTACCTA GGAGGAGCAA CAACCAGAGG CCGGAGAGTT CTGTTGCTGT TCCCAGGAGT TTCTTAGATC AGAGGGTGAA GTATAATAGG GAAGAGTTGG TTGCTCTACA AAAGTCGCCT TTATCACAAT TGCTGCCACG GGAAGAACTT GTCAGTGTAC CTGATATTCT AGCTGATTCC GTGATTTGAA GCAAAATGGT TGAACAAGTA ATATTTTAGT AACACCTGAA ATGAATTAGG AGAGATCTTA GCA 
Length1863
Protein Sequence
Protein Residue
Map Locationscaffold_7: 7329040.. 7331944
Download Sequence
A.thaliana
AGI-codeAT4G23840.1
DescriptionLeucine-rich repeat (LRR) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.16441 Ahg926472 Pentatricopeptide repeat (PPR) superfamily protein
11.4018 Ahg941044 Bromodomain transcription factor
21.0713 Ahg480585 F-box/RNI-like superfamily protein
28.3549 Ahg471074 Cysteine proteinases superfamily protein
38.6005 Ahg494464 RNAse THREE-like protein 3
40.4969 Ahg497403 HR-like lesion-inducing protein-related
44.2267 Ahg930194 IQ-domain 5
75.02 Ahg926372 Domain of unknown function (DUF220)
76.9285 Ahg477551 cellulose synthase-like D3
78.9937 Ahg478829 2-oxoglutarate-dependent dioxygenase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression