Detail



ID : Ahg480678

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480678|fgenesh2_kg.3__3379__AT2G17800.1
Sequence
GCAAAACAAT CGGAGAAAGT TGATGGAGGA GATTGTTCGT ATTGTGAACG CTTCAATGGC ATAAATTTCC GGCCATCACA TTTCCTCTAC TTCCTCTCGA TTCATCGTTG TTCACCTTCA TTCTTCTTCT CCTTCTTCTT TTCATCTCTC ACATTTCCGA TTCCAATTAG GGTTTCCTCT TTTAACATCT CTAGGGTTTT TCTTCTTTGT TCTGTACCGG AGATGGTGAA TTGAAAGGAG CAAAAACGCT ATTGAGAGCT TATTTTTAGG TTGTTTCCTC AGGTTTTTGT AGATCTGAGG TTGCTATTTT TACGTACGTA GCTCCATTTC TGGTGGAGAA GAAGAGAAAT GAGCGCTTCG AGGTTCATAA AGTGCGTCAC CGTTGGCGAC GGAGCTGTTG GTAAAACCTG TTTGCTGATT TCTTACACCA GCAACACTTT TCCTACGGAT TATGTACCGA CTGTTTTCGA TAACTTTAGC GCAAATGTGG TTGTTAATGG AGCCACGGTG AACCTAGGAT TGTGGGATAC CGCAGGGCAG GAGGATTATA ACAGATTAAG ACCTTTGAGT TACCGCGGTG CTGACGTTTT CATCTTAGCA TTCTCTCTTA TCAGTAAGGC TAGTTATGAG AATGTTTCCA AGAAGTGGAT CCCAGAGCTG AAGCACTATG CCCCTGGTGT CCCAATAGTT CTTGTTGGAA CCAAACTAGA TCTTCGGGAT GACAAACAGT TCTTCATTGA CCACCCTGGC GCTGTACCTA TTACCACTGC TCAGGGAGAG GAACTGAAGA AGCTAATTGG AGCTCCTGCA TACATCGAGT GCAGTTCAAA AACACAGGAG GCAAGAAACA AAAACTTCCC TTTTAACGTG AAAGGTGTAT TTGATGCAGC GATCCGAGTG GTTCTTCAAC CTCCAAAGCA GAAGAAAAAG AAAAGCAAAG CACAAAAAGC CTGCTCCATT TTGTAATTTC TCTACGTTTT CCTAATCTCT CTCTGTCTCA TCCACTCTTC TTCTAGTGAA GGCTTAAGAA GAAAAC 
Length1036
Protein Sequence
Protein Residue
Map Locationscaffold_3: 21015511.. 21017834
Download Sequence
A.thaliana
AGI-codeAT2G17800.1
DescriptionArabidopsis RAC-like 1
TAIR curator summaryA member of ROP GTPase family. Rac-like GTP-binding protein ARAC1/ATGP2. Encodes a geranylgeranylated GTP binding protein. Involved in the auxin-activated 26S proteasome-dependent Aux/IAA proteolysis pathway.
Alias[ARAC1][ATGP2][ATRAC1][ATROP3][ROP3][Arabidopsis RAC-like 1][RHO-RELATED GTPASES FROM PLANTS 3]
Gene coexpression
MR
MR Locus Description
7.07107 Ahg478119 RNA-binding (RRM/RBD/RNP motifs) family protein
20.199 Ahg495765 histone acetyltransferase of the GNAT family 2
27.9821 Ahg481579 proteasome family protein
30.4631 Ahg312926 cytomatrix protein-related
31.8119 Ahg486467 methionine aminopeptidase 2B
33.4066 Ahg347077
39.95 Ahg937456 RNA recognition motif (RRM)-containing protein
41 Ahg952212 ribosomal protein L23AA
42.45 Ahg331135 Protein of unknown function (DUF616)
42.7785 Ahg909665 SNARE-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression