Detail



ID : Ahg480928

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480928|fgenesh2_kg.3__3629__AT2G20850.1
Sequence
CTCTCTCTCT CACTTGCAAA AACACATTCC TTTTTAATAT AAAGAACACA ACTTTTCTCT TACTCACCTT TCTCCTCCGT CTATCGAACC GGATTTGGTT CTACCAAAGA AGTAACAGAA ATAAGATGAG AAGCAGAAGA ACAGAGTTAA GATGAGAAGA CAACAACATC TGCTTCCTGG GTTTTCTTGT CTTTTTCCTT ATCTCCTATC TCTCCTTGTC ACTTGCTCTT ACCAATCCTG ACGATCGATG TTGCGGCTAT TAACAGCCTC TTCCTTGCAC TGGAGTCTCC TCTTCTCCCT GGTTGGGTTG CATCTAGAGG TGATCCATGT GGCGAGAGCT GGCAAGGTGT TTTATGTAAT GCTTCCCAAG TAGAAACCAT AATTCTCATC AGTGCCAATC TTGGAGGAGA GCTTGGTAAT TCTCATCAGT TCCAATCTTG GAGGAGAGCT TGGTGTGGTT TAAACATGTT TACTTCTCTT AAAGCAATGG ATTTTAGCAA CAATCACATT GGAGGAATGT TCTCATTAGA TAAGGGTAAT TTGGTCATTT TGTTCAAGAG AATGTTTCTT TCTGGTAACA AGTTTACAGG AACCATCCCA GAATCTCTTT CCTCCTTAAA ATCTTTGTCT GTCATGTCCT TGAACAATAA CCTTTTGTCT GGCAAGATAC CCGATGTCTT TCAAGACCTT GGCCTTATGA TCAATCTAGA TTTGTCTAGC AACAATCTGA GTGGACCATT GCCTCCTTCC ATGCAGAATC TTTCGACTCT TACATCCTTG CTTTTGCAGA ACAATCATCT TTCAATAGAG CTTGATGTTC TTCAAGATCT TCCCCTCAAG GACTTGAATG TCGAGAACAA CCTCTTCAAT GGATCTATAC CAGAAAAGTT GTTGGGTATA CCAAATTTCA TAAAAGGCGG TAACCTGTTT AACGTCACTA TTGCTCCATC GCCTTCACCT GAAACACCTC CAAGTCCAAC ATCACCTACG CGGCCGTTTT TTGGACCACC ATCTACCAAT GCATCAACTG GTCATGGTCA GGCACATGTG AGATCACCCC CTTCTGATCA CCCATCTCGA CCTACTCCTC AAGGGGAAAA AGATTCATTT ACCAGGAAAA GAATCATTTG GATATCCATT CTTGGGGCCT TTTCATTTTT GTTTTTGGCC TTGGTATGCC TACTTTGTGG GAGGAAATGT CTCAGAAGAA GAGAAGACAG TGAACAACTA TCCAAACCGC ACCTAACTAG TGAATATGGG AGGGCAAGGG AGGGTTCTCG CTCCAATGCT TCTATGCTTC CTCCATCCGA TACATTCAAT AAAGACAAGG AGGCTAAACC AAAAGAGAGA ATAGGGGGTG CTTCGAAGCT GCAGAGTGGG GCAGAAAGAA GCGTAGGAAG TGAATCGAAG CAGGAGAGTC ATGAGAGAGA CATGAATGGC AATGCTATGG ATTTGATGTA TCCCTCATCA ATTCCACCTA TCAAAAGGGT CATCGCAAAG GCGACTGTAC CTGCTGAAGC ATCTCTAAAG AAGCCATCCA GTAAATCCTT TGGTCCCTTG ACATCCGTGA AGCACTTCAC GGTTGCATCT CTACAACAAC ACTCTCCCAG GAAAACCTTA TTGGAACGGG CATGCTTGGG AGTGTCTACA GGGCAGAGTT TCCAGCTTTT GGCTGTGATG AAGTTGGATA AGAAGTCTTC CAATCATACA GAACAAGGGA AATTTGTGGA GCTAGTGAAT AATATAGATA GAATCCGACA AGCCAATATT GTCCAACTCG TGGGTTTCTG TTCTGAGCAC AGTCAGAGGC TTCTGATCCA TGAGTATTGT AGGAACGGTA CTCTGCACGA TTTGCTGCAT ACTAATGACA GGTTAATGAT TAAACTATCA TGGAATATCC GTGTTAGGAT GGCACTAGAA GCCGCAAAAG CTCTGGAGTA TCTGCATGAG ATCTGTGATC CACCTAGTAT TCACCGAAAT TTCAAGTCTG CAAATATTCT CCTTGATGAC GATCTGAGGG TGCATGTCTC AGACTGTGGC TTGGCTTCCC TAATCTCCTC AGGTGCCGTT AGTCAGTTAT CGGGTCAACT CTTAGCGGCC TACGGATATG GAGCTCCAGA GTTTGAATAT GGGATCTATA CAATGAAATG TGATGTCTAC AGTTTTAGAG TGGTTATGTT AGAACTCTTG ACAGGCCGCA AGTCATATGA CAAGAAACAG GATAGAGGAG AGCAGTTTCT GGTGAGATGG GCAATCCCGC AGCTTCACGA CATTGATGCA TTAGCGAAGA TGGTCGACCC ATCTCTCAAG GGTGATTATC CTGCCAAGTC GCTGTCACAT TTTGCTGATG TGATATCACG TTGTGTTCAG TCGGAACCAG AGTTCAGGCC ACTAATGTCA GAAGTGGTTC AAGACCTCTC AGACATGATC CAGAGAGAAC ATCGGAGAAA TGACTCAAAT GGGGATAATC AGTATGCAGG AAGAAGATAG TTTAAGGAGA CTGTCTCTTA TACAAAACTA GTATTATAGT ATTGTTTCGA AAGTCGCAAC CATTGTTCTT TAACGAAGCC TTGTTTGTAT TATTGTATAT GTAGACTGTG TGATTTAGTC TATCCACAAC ATTCCAATGT ACTAACTTAT TTCCACCGGA TTAGGATTGG CAATCTCTGA GTTTTTTTTT CCAAAAATCC ATAGTTGAAT CTTTTTTTTT TCTTTTCTAA ATAGCATTTG ATCATAT 
Length2737
Protein Sequence
Protein Residue
Map Locationscaffold_3: 22694970.. 22698883
Download Sequence
A.thaliana
AGI-codeAT2G20850.1
DescriptionSTRUBBELIG-receptor family 1
TAIR curator summary
Alias[SRF1][STRUBBELIG-receptor family 1]
Gene coexpression
MR
MR Locus Description
11.5758 Ahg324042
15.0997 Ahg490741 Tetratricopeptide repeat (TPR)-like superfamily protein
23.9374 Ahg903252 FtsH extracellular protease family
49.4975 Ahg489009 methionine synthase 3
50.1996 Ahg471265 Pentatricopeptide repeat (PPR) superfamily protein
54.5527 Ahg483986 DEGP protease 2
56.6833 Ahg935024 Tetratricopeptide repeat (TPR)-like superfamily protein
59.7495 Ahg485626 alpha/beta-Hydrolases superfamily protein
63.8749 Ahg473594 5'-3' exonuclease family protein
64.5755 Ahg938054 Mitochondrial substrate carrier family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression