| Annotation |
|---|
| Description | jgi|Araly1|481235|fgenesh2_kg.4__295__AT2G23740.1 |
| Sequence |
TTTTTTTTTT TTGTTGGTTC TTCTTCCGTG ACCTAGCCTT TGATTCCGCC ATGTCTGTTT CCATGTGTAT CCTAACAAGT TATTGTGTTA CCTGACCTTA CCCAAATGTT AAACTTTCTT TGTTTTGTGG CAGCATTTTA ACATTTTTTG GTCACCTCCA CCTGGGTTTG TTGATTGGTC ATGTTATTGA TCTTCAATTT GAATTGTGTG ATTTTATCAA ATCCTGGGTT TAAAGAAGTG AAGTATCTTC TAAGTGGTGA TTTATGGAAG TTGTAATGGA TGAATTGGTT CTTGACGTGG ATGTTGAGGA GGCAACTGGT AGTGAATTGT TGGTGAAACC TGAGCCTGGT GATGATTTCA ATGCGGTGAA GCGTAGTACC GATTTAGTTA CGGTAATTAC CGGACCTATT GGTAATAATG GCGAAGGCGA GTCCTCTCCT TCTGAGCCCA AATGGCTGCA AGAAGATGAA CCTATAGCTT TGTGGGTGAA GTGGAGAGGT AAATGGCAGG CTGGAATCAG ATGTGCGAAA GCGGACTGGC CATTGACAAC TTTGAGAGGG AAACCAACTC ATGATAGGAA AAAGTATTGT GTGATTTTTT TCCCGCATAC GAAAAACTAC TCGTGGGCGG ATATGCAGCT TGTTCGATCC ATCAATGAGT TTCCTGATCC TATTGCATAT AAGTCACACA AAATTGGACT TAAATTGGTT AAAGATTTAA CTGCTGCTCG ACGCTACATT ATGAGGAAGC TTACTGTTGG GATTTTCAAT ATAGTTGACC AATTCCCCTC AGAGGTTGTT TCTGAAGCAG CTAGGGATAT TATAATCTGG AAAGAATTTG CAATGGAGGC TACTAGAAGC ACAAGTTATC ATGATCTTGG GATAATGCTT GTGAAGCTTC ACAGTATGAT TTTGCAACGA TACATGGATC CGATCTGGCT TGAGAACTCG TTTCCTTTGT GGGTACAAAA ATGTAACAAT GCAGTGAATG CCGAGAGTAT TGAATTACTG AATGAGTGGA GTGAAGTCAA ATCACTTTCT GAGTCTCCAA TGCAACCGAT GTTGTTGTCA GAATGGAAAA CGTGGAAGCA TGACATTGCG AAATGGTTCT CGATATCTCG CCGTGGTGTT GGCGAAATAG CACAGCCGAA TAGTAAAAGT GTGTTTAACT CAGATGTCCA GGCTAGCCGT AAAAGACCAA AACTTGAGAT TCGACGAGCA GAGACGACAA ATGCATCACA GATGGAGTCT GATACGTCAC CACAAGGATT GACTGCAATT GACTCGGAAT TCTTTAGTTC TCGAGGCAAC ACTAATACTC CTGAGGCGGT GAAAGATGAA AACCCGATAA TGAATACACC GGAGAATGGT TTGGATCTAT GGGATGGCAT TGTTGTTGAA GCAGGTGGTT CACAGATCAT GAAAACAAAA GAAACTAATG GATTGTCTCA CCCACACATT AACGAATCAG TTTTGAAGAA ACCATTTGGT TCAGGAAATA AGAGTCAGCA ATGCATAGCT TTCATTGAAT CGAAAGGAAG GCAATGTGTG AGGTGGGCGA ATGAAGGTGA TGTTTATTGT TGTGTGCATT TAGCTTCTCG TTTCACCACC AAATCTGCAA AGAACGAGGG CTCTCCTGCA GTTGAAGCAC CAATGTGCGG AGGAGTTACT GTTCTTGGTA CCAAATGCAA GCACCGATCT CTACCCGGGT TTTTGTACTG CAAGAAACAC CGCCCTCATT CAGAGATGGA GAAACCTGAT GATTCTTCAT CTCTTCTGGT GAAGAGAAAG GTAGCGGAAA TTATGTCAAC CTTAGAAACA AATCAATGTC AAGATTTGGT GCCGTTTGGA GAACCAGAAG GTCTATCTTT CGAGAAACAG GAGCCCCATG GAGCCACGAG CTTCACTGAG ATGTTTGAAC ATTGTAGCCA AGAGGATAAC TTGTGTATAG GTTCTTGCTC AGAAAACAGC TATATTCCTT GCAGTGAGTT CTCGACAAAG CACTCGTTAT ACTGTGAACA GCACCTTCCT AACTGGCTTA AGCGTGCGAG GAATGGTAAG AGTCGAATAA TATCAAAGGA AGTCTTTGTA GATCTCTTAA GGGGTTGTTT ATCGCGTGAG GAAAAATTAG CTCTACATCA AGCTTGTGAT ATTTTCTACA AGCTCTTCAA AAGTGTCTTA TCTTTAAGAA ACTCTGTGCC AATGGAGGTA CAGATTGATT GGGCGAAAGC AGAAGCTTCA AGAAACGCGG ACGTTGGAGT TGGGGAATTC TTGATGAAGT TGATATCCAA TGAAAGGGAG AGATTAACTA GGATATGGGG TTTCCCTACT GGTGCTGATG AAGAAGATGT ATCATTATCA GAATATCCTA ATCGACTGCT TGCCATCACC AATGCCTGGG CGGATGATGA AGACAAAGAG AAATGGTCTT TTAGTGGATT TGCTTGTGCT ATTTGCTTAG ATTCTTTTGT GAAGAGAAAG CTTTTGGAAA TTCATGTGGA GGAGAGGCAT CACGTGCAGT TTGCGGAAAA GTGTATGCTT CTTCAGTGTA TTCCTTGTGG CAGTCATTTT GGAGATAAAG AACAGTTGCT GTTACATGTG CAAGCTGTGC ATCCTTCTGA GTGCAAATCG CTAACGGTTG CTTCTGAGTG CAATTTGACT AATGGTGAGT CTTCTCAGAA ACCTGAAGCA GGCAGTTCAC AAATTGTTGT GAGCCAAAAC AACGAGAATA CAAGCGGCGT ACATAAATTT GTTTGCAAGT TCTGTGGGCT GAAATTCAAT TTATTACCTG ACCTAGGCCG TCACCATCAA GCTGAACACA TGGGATCGAG TCTAGTTGGC TCTCGTGGTC CGAAGAAAGG AATAAGGTTT AATACATACA GGATGAAATC TGGTAGGCTT AGTCGTCCGA ATAAATTCAA GAAAAGTCTT GGAGCAGTCT CATATAGGAT TAGAAACCGG GCTGGTGTAA ATATGAAGAG GAGGATGCAA GGTTCTAAAC CGCTCAGCAC GGAAGGAAAC ACTGGAGTAT CGCCGCCGCC TCCGGGTGAT AGTAGAAACT TTGATGGTAC AGATGCTCAT TGCTCTGTGG TTTCGAATAT ATTGTTGTCA AAGGTTCAGA AAGCGAAGCA TCGCCCTAAT AACTTTGATA TCCTGTCTGC TGCTCGATCG GCTTGCTGTA GGGTGAGCCT TGAGACCTCT TTGGAGGCTA AATTCGGGGA TTTGCCTGAC CGGATATATC TCAAGGCAGC AAAACTTTGC GGTGAGCAAG GTGTACAAGT GCAATGGCAT CAGGAAGGAT ACATATGCTC TAACAGATGT AAGCCTGTTA AAGACCCAAA TCTTCTACGT CCCTTGATCC CTCGACAAGA GAATGATCGA TTCGGGATAT CTATGGACCC TGGACAACAT TCTAATATCG AGTTGGAAGT TGATGAGTGC CATTGTATCA TGGAGGCTCA TCATTTTAGT AAGAGACCAT TTGGAAACAC CGCGGTTTTG TGCAAGGACA TAAGCTTTGG TAAGGAATCA GTTCCAATTT GTGTCGTCGA TGATGATCTT TTGAATTCTG GAAAGCAGCA TGAGAGGCCT TGGGAAAGCT TTACTTATAT TACAAACTCA ATACTTCATC CGTCAATGGA ACTTGTAAAG GAGAATCTGC AACTCAGATG TGGCTGTCGC AGTTCAGTGT GCTCGCCTGT AACTTGTGAT CACGTATACC TTTTTGGTAA CGATTTTGAG GACGCTAGAG ACATATATGG AAAATCCATG AGGTTTAGAT TCCCATATGA TGGCAAACAA CGGATCATCT TGGAGGAGGG TTATCCTGTT TATGAATGCA ATAAGTTCTG TGGATGCTCT AGAACATGTC AGAATCGGGT TTTGCAGAAT GGAATTCGCG TGAAACTAGA AGTTTTTAGA ACTGAAAGCA AGGGATGGGG ATTGCGAGCT TGTGAACATA TACTGCGTGG CACATTTGTT TGCGAATACA TTGGGGAGGT TCTTGATCAG CAAGAAGCAA ACAAGAGGCG AAACCAGTAT GGAAAAGAAG GTTGCAGCTA CTTACTGGAC ATTGATGCTA ATATCAACGA CATCGGTAGA TTGATGGAAG AAGAGCCCGA TTATGCTATT GATGCTACTA CTCATGGCAA CATCTCTCGA TACATCAATC ACAGCTGCTC ACCAAATCTC GTTAATCACC AAGTTATTGT GGAAAGCATG GAGTCCCCGC TCGCTCATAT CGGTCTATAC GCCAGTATGG ATGTTGCTGC AGGAGAAGAG ATCACCCGAG ACTATGGATG CAGACCGGTA CCAACTGGAC AAGAAAATGA GCATCCATGC CATTGTAAAG CAACTAATTG CAGAGGTCTC TTAAGTTAGA TTTTGGTTCC TAGGAACATT CTTTGCAGAT TTGTTTTAAT AATTTTCCTT CAGACTTTTT ACCTTTTTTC CCTTGAATCT TTAGACAGCT TTGGAACTAT TCATTTTCCT TCAAGCTTGT GACTTTTATA ATCAAATCTT GATTTCTCCT TTCTC |
| Length | 4535 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 1893790.. 1899657 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G23740.2 |
| Description | nucleic acid binding;sequence-specific DNA binding transcription factors;zinc ion binding |
| TAIR curator summary | |
| Alias | [SUVR5][SU(VAR)3-9-RELATED protein 5] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1 |
Ahg474017 | associated molecule with the SH3 domain of STAM 1 |
| 6.32456 |
Ahg912607 | nucleic acid binding |
| 18.3303 |
Ahg484508 | global transcription factor group E8 |
| 21.4476 |
Ahg479495 | |
| 21.9773 |
Ahg495386 | DNAJ heat shock N-terminal domain-containing protein |
| 23.6643 |
Ahg488386 | U-box domain-containing protein |
| 24.8193 |
Ahg485198 | Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2 |
| 25.2982 |
Ahg489733 | OSBP(oxysterol binding protein)-related protein 1C |
| 27.0185 |
Ahg941624 | TRICHOME BIREFRINGENCE-LIKE 16 |
| 29.6479 |
Ahg493575 | xylogalacturonan deficient 1 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|