| Annotation |
|---|
| Description | jgi|Araly1|493575|fgenesh2_kg.7__3008__AT5G33290.1 |
| Sequence |
AACAAGTTGC TTGGTGAACT AAAACTCATT TCTTCCACTA ATGATATGAT AGAGACATAC CAAAGAATCT TTCATGACTT TTCTTCTTTT CTCCTCACTT CCAAAATTCT CTTCTGTCTT CCTCTTAAGA GTAAAGAATC AAAAAAAGGA ACCCAAAGAA AAAAAATAAC ATAGCCATGG CTGCTCCAAG ATCAAGAAGA TGCTCTCTTT CTCTCTTAAC CCTTATCTCC ATCTCTCTTA TTCTTATTTC TGTTTCACTC TTTGTCTCCA CAAAACCAAC TAGTAAGCCC TTAATTGATT ACAGAAACCA ATTCTCTGTT TCTATCTCTT CTCCTCCTTC TCCATCTCTT CTTGAACAGA ACAACACAAC ACACACTAGT CTTAGCAACA CAACAAACAC TAGTCTAATC TCAGCCTCTC CTCCTTTTTC TCATCTCGGA CAAAACAATA CAACAAACAC TACTCTTGCT TCTTCATCCT CTTTTTCTGA TCACCAAAAC CAAAATAAGT CTCCAAGTCC TACAAGTAAA AAAGTTGTAA TTAAGAAAAG AAGTGGGTTG GATAAAATAG AATTAGATTT AGCAAAAGCA AGAGCAGCAA TTAAGAAGGC AGCTTCTACA CAAAATTATA TCAGCTCTCT CTACAAAAAC CCAGCCGCCT TTCATCAGAG TCACACGGAA ATGATGAATC GTTTTAAGGT GTGGACATAC ACAGAGGGAG AGGTCCCCCT GTTCCATGAC GGCCCTGTGA ATGACATTTA CGGTATAGAA GGACAGTTCA TGGACGAAAT GTGCGTGGAC GGACCGAAGA GTAGAAGCCG TTTTCGGGCG GATCGCCCCG AGGATGCTCA CGTTTTCTTC ATACCATTTA GCGTCGCCAA GGTCATCCAC TTCGTCTACA AGCCCATCAC CTCTGTCGAA GGATTTTCGC GGGCTCGCCT ACACCGTCTT ATAGAGGATT ATGTTGATGT AGTTGCTACT AAGCATCGCT ATTGGAACAG AAGCCAAGGT GGCGACCATT TCATGGTATC ATGCCATGAC TGGGCACCAG ACGTGATCGA TGGGAATCCA AAGTTGTTTG AAAAATTCAT AAGGGGTCTT TGCAATGCTA ACACATCGGA AGGATTCCGG CCTAACGTGG ATGTATCCAT TCCGGAGATA TACCTTCCTA AAGGTAAATT GGGTCCGTCT TTTCTCGGAA AATCACCGAG AATTCGATCT ATACTCGCAT TTTTTGCTGG AAGAAGTCAC GGTGAAATCC GAAAAATCTT ATTTAAACAT TGGAAAGAAA TGGACAATGA AGTCCAAGTC TATGATCGTC TTCCCCCAGG AAAGGACTAT ACAAAAACTA TGGGAATGAG TAAGTTTTGT CTGTGTCCGA GTGGTTGGGA GGTCGCTAGC CCGAGAGAGG TCGAGGCGAT ATATGCTGGT TGTGTACCGG TGATCATATC GGATAATTAT TCATTACCAT TCAGTGATGT GCTTAATTGG GATTCCTTTT CCATACAAAT CCCTGTTTCT AGGATACCAG AGATCAAAAC CATTCTACAG AGTGTTTCTC TCGTAAGATA CTTGAAGATG TATAAGAGAG TCTTAGAAGT GAAGCAACAT TTCGTGTTGA ATCGTCCAGC TAAACCCTAC GATGTGATGC ATATGATGCT TCACTCTATC TGGTTAAGAC GACTTAATCT TAGGCTGGGG GCATAGTATA TAATTTTTTT GTTGTTACAA ATAATTCTTA AGTGTCAAAG TTCATATGAG TTACTAGCTT TGTATTCTTT CCATAAATTT TCATAGTTCT TTCTTGTAAA AATATATACA ACAACAAACA CAATATCAAA GATTTCCATA TTAATAAGAG AAACAAAGCA ATTGTTATTC TTGTT |
| Length | 1885 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 16861035.. 16864731 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G33290.1 |
| Description | xylogalacturonan deficient 1 |
| TAIR curator summary | Acts as a xylogalacturonan xylosyltransferase within the XGA biosynthesis pathway. Involved in pectin biosynthesis. |
| Alias | [XGD1][xylogalacturonan deficient 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 16 |
Ahg943129 | Copper amine oxidase family protein |
| 17.9165 |
Ahg480822 | heavy metal atpase 4 |
| 18.4391 |
Ahg480549 | multimeric translocon complex in the outer envelope membrane 132 |
| 18.9737 |
Ahg481811 | Protein kinase superfamily protein |
| 20 |
Ahg483541 | methionine aminopeptidase 2A |
| 22.7596 |
Ahg934176 | |
| 23.5584 |
Ahg330245 | acetyl-CoA synthetase |
| 25.2982 |
Ahg488059 | CRT (chloroquine-resistance transporter)-like transporter 3 |
| 25.7488 |
Ahg358770 | indole-3-acetic acid inducible 9 |
| 27.3496 |
Ahg889705 | O-fucosyltransferase family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|